RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SSMEM1Q8WWF3 244 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 SMIM8Q96KF7 97 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 HARBI1Q96MB7 349 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 WNT5BQ9H1J7 359 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 AP5S1Q9NUS5 200 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 MTCH1Q9NZJ7 389 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 ARHGAP32A7KAX9 2087 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 A0A1W2PRE2 83 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 B5MCH6 92 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 J3QR06 171 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 IAPPP10997 89 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 APOC4P55056 127 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 WDR25Q64LD2 544 aaPredicted RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 WDR86Q86TI4 376 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 MAP1LC3AQ9H492 121 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 IGHV2OR16-5A0A0B4J2B6 119 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 ADAM20O43506 726 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 PF4P02776 101 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 DUTP33316 252 aaKnown RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 IFI27P40305 119 aaPredicted RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 PIK3CD-AS1Q5SR53 167 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 C11orf44Q8N8P7 122 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 FOXC2Q99958 501 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 CISD1Q9NZ45 108 aaKnown RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 TRAV5A0A0B4J249 113 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 IGHV1-2P23083 117 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 GATA4P43694 442 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 PTTG1IPP53801 180 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 TMEM249Q2WGJ8 235 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 TMEM95Q3KNT9 176 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 C9orf139Q6ZV77 190 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 Q6ZWC4 215 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 LINC00469Q8N7U9 141 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 SPSB4Q96A44 273 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 RBFOX3A6NFN3 312 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 SHISA9B4DS77 424 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 FCN1O00602 326 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 SSSCA1O60232 199 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 FCGR2BP31994 310 aaPredicted RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 LEPP41159 167 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 LOXL3P58215 753 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 TM2D1Q9BX74 207 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 NPDC1Q9NQX5 325 aaPredicted RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 LEPROTL1O95214 131 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 FOLR2P14207 255 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 PRTN3P24158 256 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 ELLP55199 621 aaPredicted RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 RBM11P57052 281 aaKnown RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 FOXE3Q13461 319 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 C1QL4Q86Z23 238 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 OR5C1Q8NGR4 320 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 A1L4Q6 167 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 OCIAD2Q56VL3 154 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 HOGA1Q86XE5 327 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 C9orf62Q8N4C0 152 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 CYB561D1Q8N8Q1 229 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 OR2K2Q8NGT1 345 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 ZNF703Q9H7S9 590 aaPredicted RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 GNB4Q9HAV0 340 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 UQCR10Q9UDW1 63 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 GAB2Q9UQC2 676 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 ITPR2Q14571 2701 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 PPIAL4CA0A0B4J2A2 164 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 A0A1B0GW54 56 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 A0A1B0GW64 132 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 OVOL1O14753 267 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 C1orf147Q96MC9 270 aaPredicted RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 SCGB3A1Q96QR1 104 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 PRSS22Q9GZN4 317 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 GTSF1LQ9H1H1 148 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 PCNX1Q96RV3 2341 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 ETV2O00321 342 aaPredicted RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 SFT2D2O95562 160 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 MLANAQ16655 118 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 FAM78BQ5VT40 261 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 TMEM123Q8N131 208 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 NAA38Q9BRA0 125 aaKnown RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 SLC25A39Q9BZJ4 359 aaPredicted RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 METTL1Q9UBP6 276 aaKnown RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 TRAPPC1Q9Y5R8 145 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 IGHV1-69-2A0A0G2JMI3 117 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 HLA-DRB1P01911 266 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 GZMBP10144 247 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 WFDC8Q8IUA0 241 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 GLMPQ8WWB7 406 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 CCL19Q99731 98 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 C5orf66Q9H5L9 145 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 SLC25A15Q9Y619 301 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 USP24Q9UPU5 2620 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 IGKV3D-15A0A087WSY6 115 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 H7C423 109 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 M0R2P5 195 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 ZNF735P0CB33 412 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 COL5A1-AS1Q5SY13 56 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 MEGF9Q9H1U4 602 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 SDF2L1Q9HCN8 221 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 F11RQ9Y624 299 aaKnown RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 Q56UQ5 140 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 ZNF788Q6ZQV5 615 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 C1orf229Q6ZS94 237 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms