RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 TIMM9Q9Y5J7 89 aa13.06□□□□□ -0.32
CMTM3-208ENST00000564247 A0A1W2PRX2 142 aa13.05□□□□□ -0.32
CMTM3-208ENST00000564247 PPP5D1E7EU14 171 aa13.05□□□□□ -0.32
CMTM3-208ENST00000564247 I3L521 148 aa13.05□□□□□ -0.32
CMTM3-208ENST00000564247 IGKV1-17P01599 117 aa13.05□□□□□ -0.32
CMTM3-208ENST00000564247 ATP6V0CP27449 155 aa13.05□□□□□ -0.32
CMTM3-208ENST00000564247 RPL29P47914 159 aaKnown RBP13.05□□□□□ -0.32
CMTM3-208ENST00000564247 ZNF90Q03938 601 aa13.05□□□□□ -0.32
CMTM3-208ENST00000564247 ZNF600Q6ZNG1 722 aa13.05□□□□□ -0.32
CMTM3-208ENST00000564247 Q6ZRG5 221 aa13.05□□□□□ -0.32
CMTM3-208ENST00000564247 GGTLC1Q9BX51 225 aa13.05□□□□□ -0.32
CMTM3-208ENST00000564247 ADARB2-AS1A8MUL3 147 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 YIF1AO95070 293 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 TOMM40O96008 361 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 TRBV12-3P01733 135 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 ADMP35318 185 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 RPEL1Q2QD12 228 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 FAM106AQ4KMX7 169 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 OR51G1Q8NGK1 321 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 OR1N2Q8NGR9 330 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 ST8SIA2Q92186 375 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 PSMG3Q9BT73 122 aaPredicted RBP13.04□□□□□ -0.32
CMTM3-208ENST00000564247 RSG1Q9BU20 258 aa13.04□□□□□ -0.32
CMTM3-208ENST00000564247 LINC01619G3V211 115 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 OR2C1O95371 312 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 PSG1P11464 419 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 ZP3P21754 424 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 SERF2P84101 59 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 NSUN5P1Q3KNT7 163 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 MIC13Q5XKP0 118 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 C18orf65Q6ZTR6 163 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 STPG3Q8N7X2 389 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 OR11H1Q8NG94 326 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 OR2G3Q8NGZ4 309 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 SLC25A32Q9H2D1 315 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
CMTM3-208ENST00000564247 BMPR1BO00238 502 aa13.02□□□□□ -0.33
CMTM3-208ENST00000564247 SEC11BP0C7V7 166 aa13.02□□□□□ -0.33
CMTM3-208ENST00000564247 GATA2P23769 480 aaPredicted RBP13.02□□□□□ -0.33
CMTM3-208ENST00000564247 B2MP61769 119 aa13.02□□□□□ -0.33
CMTM3-208ENST00000564247 PXDC1Q5TGL8 231 aa13.02□□□□□ -0.33
CMTM3-208ENST00000564247 C8orf86Q6ZUL3 223 aa13.02□□□□□ -0.33
CMTM3-208ENST00000564247 OR4F17Q8NGA8 305 aa13.02□□□□□ -0.33
CMTM3-208ENST00000564247 OR4F4Q96R69 305 aa13.02□□□□□ -0.33
CMTM3-208ENST00000564247 SLC39A9Q9NUM3 307 aa13.02□□□□□ -0.33
CMTM3-208ENST00000564247 PUS1Q9Y606 427 aaKnown RBP eCLIP13.02□□□□□ -0.33
CMTM3-208ENST00000564247 IGHV4OR15-8A0A075B7B6 117 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 A0A087WW49 117 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 IGHV3-35A0A0C4DH35 117 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 NDUFA4O00483 81 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 MBP02144 154 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 LINC00869P0C866 280 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 SPP1P10451 314 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 PRR20EP86478 221 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 PRR20CP86479 221 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 PRR20DP86480 221 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 PRR20BP86481 221 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 PRR20AP86496 221 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 FFAR4Q5NUL3 377 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 S100A7AQ86SG5 101 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 GPHB5Q86YW7 130 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 SH3BGRL3Q9H299 93 aa13.01□□□□□ -0.33
CMTM3-208ENST00000564247 ZNF320A2RRD8 509 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 CCL24O00175 119 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 ORM2P19652 201 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 S100A7P31151 101 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 LYZP61626 148 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 DEFA6Q01524 100 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 DEFB136Q30KP8 78 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 ACOT6Q3I5F7 207 aaPredicted RBP13□□□□□ -0.33
CMTM3-208ENST00000564247 AKR1C8PQ5T2L2 129 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 TOMM20LQ6UXN7 152 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 TMEM182Q6ZP80 229 aaPredicted RBP13□□□□□ -0.33
CMTM3-208ENST00000564247 OR1L4Q8NGR5 311 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 PHYHIPLQ96FC7 376 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 PBDC1Q9BVG4 233 aa13□□□□□ -0.33
CMTM3-208ENST00000564247 ELOA3CA0A087WX78 387 aaPredicted RBP12.99□□□□□ -0.33
CMTM3-208ENST00000564247 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 COX7A2P2O60397 106 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 HYPMO75409 117 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 IL4P05112 153 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 OR5G3P0C626 314 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 HOXD3P31249 432 aaPredicted RBP12.99□□□□□ -0.33
CMTM3-208ENST00000564247 ELLP55199 621 aaPredicted RBP12.99□□□□□ -0.33
CMTM3-208ENST00000564247 OR1B1Q8NGR6 318 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 TMED6Q8WW62 240 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 RNF125Q96EQ8 232 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 RAX2Q96IS3 184 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 PFDN5Q99471 154 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 C20orf24Q9BUV8 137 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 DNAJC4Q9NNZ3 241 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 PFDN2Q9UHV9 154 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 RFNGQ9Y644 331 aa12.99□□□□□ -0.33
CMTM3-208ENST00000564247 UMAD1C9J7I0 102 aa12.98□□□□□ -0.33
CMTM3-208ENST00000564247 WIPF1O43516 503 aa12.98□□□□□ -0.33
CMTM3-208ENST00000564247 MYCNOSP40205 109 aa12.98□□□□□ -0.33
CMTM3-208ENST00000564247 PLP1P60201 277 aa12.98□□□□□ -0.33
CMTM3-208ENST00000564247 UFC1Q9Y3C8 167 aa12.98□□□□□ -0.33
CMTM3-208ENST00000564247 IFNA7P01567 189 aa12.97□□□□□ -0.33
CMTM3-208ENST00000564247 M6PRP20645 277 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms