RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ZFP92A6NM28 416 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 ZNF785A8K8V0 405 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 K7EIL1 84 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 K7EMT4 169 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 IL4P05112 153 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 GIPP09681 153 aaPredicted RBP7.37□□□□□ -1.23
CLK3-208ENST00000562626 ELLP55199 621 aaPredicted RBP7.37□□□□□ -1.23
CLK3-208ENST00000562626 VWC2Q2TAL6 325 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 TMEM144Q7Z5S9 345 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 TMEM61Q8N0U2 210 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 OR10P1Q8NGE3 313 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 OR51G1Q8NGK1 321 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 MGST2Q99735 147 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 WFDC1Q9HC57 220 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 DAZ1Q9NQZ3 744 aaKnown RBP7.37□□□□□ -1.23
CLK3-208ENST00000562626 SIGLEC8Q9NYZ4 499 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 SMPXQ9UHP9 88 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 UFC1Q9Y3C8 167 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 U3KQE9 123 aa7.37□□□□□ -1.23
CLK3-208ENST00000562626 hCG_2014768A0A024R1R8 64 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 UBE2L5PA0A1B0GUS4 154 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 CHEK1O14757 476 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 DEFA6Q01524 100 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 OR5C1Q8NGR4 320 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 RNF125Q96EQ8 232 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 RNF2Q99496 336 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 SMIM3Q9BZL3 60 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 VSIRQ9H7M9 311 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 MRPL27Q9P0M9 148 aaKnown RBP7.36□□□□□ -1.23
CLK3-208ENST00000562626 HSPB11Q9Y547 144 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 RFNGQ9Y644 331 aa7.36□□□□□ -1.23
CLK3-208ENST00000562626 RNF222A6NCQ9 220 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 FNDC10F2Z333 226 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 RLN2P04090 185 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 RD3LP0DJH9 198 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 CRYBB3P26998 211 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 RPL12P30050 165 aaKnown RBP7.35□□□□□ -1.23
CLK3-208ENST00000562626 INSL3P51460 131 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 RAP2BP61225 183 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 CD300CQ08708 224 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 CLINT1Q14677 625 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 FAM90A2PQ658T7 463 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 CYP2G1PQ6ZSU1 146 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 STX12Q86Y82 276 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 OR2T35Q8NGX2 323 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 DYNLRB2Q8TF09 96 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 Q8WTZ3 238 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 RHPN1-AS1Q9BWJ2 59 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 WFDC10AQ9H1F0 79 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 NPVFQ9HCQ7 196 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 SLC45A2Q9UMX9 530 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 WDR83OSQ9Y284 106 aa7.35□□□□□ -1.23
CLK3-208ENST00000562626 ZNF256Q9Y2P7 627 aaPredicted RBP7.35□□□□□ -1.23
CLK3-208ENST00000562626 AGPAT2O15120 278 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 DFFBO76075 338 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 LINC00869P0C866 280 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 GP9P14770 177 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 LYZP61626 148 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 MIC13Q5XKP0 118 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 PATE2Q6UY27 113 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 Q8N1Y9 231 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 BPIFCQ8NFQ6 507 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 OR11H4Q8NGC9 324 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 THAP6Q8TBB0 222 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 MARC2Q969Z3 335 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 ST6GAL2Q96JF0 529 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 PBDC1Q9BVG4 233 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 TMEM147Q9BVK8 224 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 GGACTQ9BVM4 153 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 GGTLC1Q9BX51 225 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 GPR61Q9BZJ8 451 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 UQCC1Q9NVA1 299 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 DOK5Q9P104 306 aa7.34□□□□□ -1.23
CLK3-208ENST00000562626 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 HNRNPCP07910 306 aaKnown RBP eCLIP7.33□□□□□ -1.24
CLK3-208ENST00000562626 CD7P09564 240 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 PET100P0DJ07 73 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 FGF7P21781 194 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 NPPCP23582 126 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 S100A11P31949 105 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 OPCMLQ14982 345 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 MORN5Q5VZ52 161 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 TEPPQ6URK8 271 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 C16orf54Q6UWD8 224 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 FAM24BQ8N5W8 94 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 GLMPQ8WWB7 406 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 C17orf77Q96MU5 243 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 AQP10Q96PS8 301 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 METTL26Q96S19 204 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 GINS3Q9BRX5 216 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 SLC25A31Q9H0C2 315 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 TECRQ9NZ01 308 aaKnown RBP7.33□□□□□ -1.24
CLK3-208ENST00000562626 FBXL17Q9UF56 701 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 TNFSF18Q9UNG2 199 aa7.33□□□□□ -1.24
CLK3-208ENST00000562626 COL7A1Q02388 2944 aa7.32□□□□□ -1.24
CLK3-208ENST00000562626 DNAH9Q9NYC9 4486 aa7.32□□□□□ -1.24
CLK3-208ENST00000562626 FXYD6-FXYD2A0A087WZ82 144 aa7.32□□□□□ -1.24
CLK3-208ENST00000562626 BUB3O43684 328 aa7.32□□□□□ -1.24
CLK3-208ENST00000562626 ORM2P19652 201 aa7.32□□□□□ -1.24
CLK3-208ENST00000562626 CAMLGP49069 296 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms