RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 BAXQ07812 192 aa16.46■□□□□ 0.23
SNX1-210ENST00000560260 BTNL8Q6UX41 500 aa16.46■□□□□ 0.23
SNX1-210ENST00000560260 LILRB2Q8N423 598 aa16.46■□□□□ 0.23
SNX1-210ENST00000560260 Q8WTZ3 238 aa16.46■□□□□ 0.23
SNX1-210ENST00000560260 TMEM147Q9BVK8 224 aa16.46■□□□□ 0.23
SNX1-210ENST00000560260 HSPB11Q9Y547 144 aa16.46■□□□□ 0.23
SNX1-210ENST00000560260 hCG_2014768A0A024R1R8 64 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 IGHV3OR16-13A0A075B7E8 117 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 IGHV3-74A0A0B4J1X5 117 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 IGHV7-4-1A0A0J9YVY3 117 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 UBE2L5PA0A1B0GUS4 154 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 WI2-2373I1.2A0A1W2PRP0 233 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 IZUMO1RA6ND01 250 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 IL4P05112 153 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 RPL12P30050 165 aaKnown RBP16.45■□□□□ 0.22
SNX1-210ENST00000560260 HBG1P69891 147 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 HBG2P69892 147 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 OR5C1Q8NGR4 320 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 MARC2Q969Z3 335 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 GINS3Q9BRX5 216 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 UQCC1Q9NVA1 299 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 MRPL27Q9P0M9 148 aaKnown RBP16.45■□□□□ 0.22
SNX1-210ENST00000560260 SMPXQ9UHP9 88 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 FBN3Q75N90 2809 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 A0A1B0GVG6 124 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 FGL1Q08830 312 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 DEFB114Q30KQ6 69 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 CYP2G1PQ6ZSU1 146 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 OR51G1Q8NGK1 321 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 DYNLRB2Q8TF09 96 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 RNF125Q96EQ8 232 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 MGST2Q99735 147 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 WDR83OSQ9Y284 106 aa16.45■□□□□ 0.22
SNX1-210ENST00000560260 PRB2P02812 416 aaPredicted RBP16.44■□□□□ 0.22
SNX1-210ENST00000560260 CLINT1Q14677 625 aa16.44■□□□□ 0.22
SNX1-210ENST00000560260 CD300EQ496F6 205 aaPredicted RBP16.44■□□□□ 0.22
SNX1-210ENST00000560260 TEPPQ6URK8 271 aa16.44■□□□□ 0.22
SNX1-210ENST00000560260 MEGF8Q7Z7M0 2845 aa16.43■□□□□ 0.22
SNX1-210ENST00000560260 IGHV3-66A0A0C4DH42 116 aa16.43■□□□□ 0.22
SNX1-210ENST00000560260 CHEK1O14757 476 aa16.43■□□□□ 0.22
SNX1-210ENST00000560260 ATP6V1FQ16864 119 aa16.43■□□□□ 0.22
SNX1-210ENST00000560260 ST8SIA2Q92186 375 aa16.43■□□□□ 0.22
SNX1-210ENST00000560260 RHPN1-AS1Q9BWJ2 59 aa16.43■□□□□ 0.22
SNX1-210ENST00000560260 SMIM3Q9BZL3 60 aa16.43■□□□□ 0.22
SNX1-210ENST00000560260 U3KQE9 123 aa16.43■□□□□ 0.22
SNX1-210ENST00000560260 FXYD6-FXYD2A0A087WZ82 144 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 AGPAT2O15120 278 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 FABP1P07148 127 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 CRYBB3P26998 211 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 LYZP61626 148 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 TMEM61Q8N0U2 210 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 STPG3Q8N7X2 389 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 AQP10Q96PS8 301 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 PBDC1Q9BVG4 233 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 VSIRQ9H7M9 311 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 WFDC1Q9HC57 220 aa16.42■□□□□ 0.22
SNX1-210ENST00000560260 TECRQ9NZ01 308 aaKnown RBP16.42■□□□□ 0.22
SNX1-210ENST00000560260 RNF222A6NCQ9 220 aa16.41■□□□□ 0.22
SNX1-210ENST00000560260 ST6GAL2Q96JF0 529 aa16.41■□□□□ 0.22
SNX1-210ENST00000560260 METTL26Q96S19 204 aa16.41■□□□□ 0.22
SNX1-210ENST00000560260 RNF2Q99496 336 aa16.41■□□□□ 0.22
SNX1-210ENST00000560260 GGTLC1Q9BX51 225 aa16.41■□□□□ 0.22
SNX1-210ENST00000560260 SLC45A2Q9UMX9 530 aa16.41■□□□□ 0.22
SNX1-210ENST00000560260 HNRNPCP07910 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNX1-210ENST00000560260 NPPCP23582 126 aa16.4■□□□□ 0.22
SNX1-210ENST00000560260 BPIFCQ8NFQ6 507 aa16.4■□□□□ 0.22
SNX1-210ENST00000560260 OR2K2Q8NGT1 345 aa16.4■□□□□ 0.22
SNX1-210ENST00000560260 PRR25Q96S07 402 aa16.4■□□□□ 0.22
SNX1-210ENST00000560260 AURKAIP1Q9NWT8 199 aaPredicted RBP16.4■□□□□ 0.22
SNX1-210ENST00000560260 TNFSF18Q9UNG2 199 aa16.4■□□□□ 0.22
SNX1-210ENST00000560260 LINC00869P0C866 280 aa16.39■□□□□ 0.21
SNX1-210ENST00000560260 FGF7P21781 194 aa16.39■□□□□ 0.21
SNX1-210ENST00000560260 ZNF546Q86UE3 836 aa16.39■□□□□ 0.21
SNX1-210ENST00000560260 ATP5SQ99766 215 aa16.39■□□□□ 0.21
SNX1-210ENST00000560260 FBXL17Q9UF56 701 aa16.39■□□□□ 0.21
SNX1-210ENST00000560260 RABAC1Q9UI14 185 aa16.39■□□□□ 0.21
SNX1-210ENST00000560260 ZNF785A8K8V0 405 aa16.38■□□□□ 0.21
SNX1-210ENST00000560260 CAMLGP49069 296 aa16.38■□□□□ 0.21
SNX1-210ENST00000560260 OPCMLQ14982 345 aa16.38■□□□□ 0.21
SNX1-210ENST00000560260 FAM90A2PQ658T7 463 aa16.38■□□□□ 0.21
SNX1-210ENST00000560260 LCN12Q6JVE5 192 aa16.38■□□□□ 0.21
SNX1-210ENST00000560260 OR11H4Q8NGC9 324 aa16.38■□□□□ 0.21
SNX1-210ENST00000560260 DOK5Q9P104 306 aa16.38■□□□□ 0.21
SNX1-210ENST00000560260 ZNF256Q9Y2P7 627 aaPredicted RBP16.38■□□□□ 0.21
SNX1-210ENST00000560260 GP9P14770 177 aa16.37■□□□□ 0.21
SNX1-210ENST00000560260 EIF2B2P49770 351 aaKnown RBP16.37■□□□□ 0.21
SNX1-210ENST00000560260 SELENOTP62341 195 aa16.37■□□□□ 0.21
SNX1-210ENST00000560260 PRR20EP86478 221 aa16.37■□□□□ 0.21
SNX1-210ENST00000560260 PRR20CP86479 221 aa16.37■□□□□ 0.21
SNX1-210ENST00000560260 PRR20DP86480 221 aa16.37■□□□□ 0.21
SNX1-210ENST00000560260 PRR20BP86481 221 aa16.37■□□□□ 0.21
SNX1-210ENST00000560260 PRR20AP86496 221 aa16.37■□□□□ 0.21
SNX1-210ENST00000560260 MIC13Q5XKP0 118 aa16.37■□□□□ 0.21
SNX1-210ENST00000560260 WDR61Q9GZS3 305 aaKnown RBP16.37■□□□□ 0.21
SNX1-210ENST00000560260 CFDP00746 253 aaPredicted RBP16.36■□□□□ 0.21
SNX1-210ENST00000560260 ORM2P19652 201 aa16.36■□□□□ 0.21
SNX1-210ENST00000560260 PLP1P60201 277 aa16.36■□□□□ 0.21
SNX1-210ENST00000560260 GLMPQ8WWB7 406 aa16.36■□□□□ 0.21
SNX1-210ENST00000560260 NPCDR1Q9BY65 106 aa16.36■□□□□ 0.21
SNX1-210ENST00000560260 SORL1Q92673 2214 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms