RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 APOC4P55056 127 aa6.89□□□□□ -1.31
SYNE2-224ENST00000557024 NANOS2P60321 138 aaKnown RBP6.89□□□□□ -1.31
SYNE2-224ENST00000557024 RHOGP84095 191 aa6.89□□□□□ -1.31
SYNE2-224ENST00000557024 AARDQ4LEZ3 155 aa6.89□□□□□ -1.31
SYNE2-224ENST00000557024 SLC25A24Q6NUK1 477 aa6.89□□□□□ -1.31
SYNE2-224ENST00000557024 PRSS54Q6PEW0 395 aa6.89□□□□□ -1.31
SYNE2-224ENST00000557024 OR2C3Q8N628 320 aa6.89□□□□□ -1.31
SYNE2-224ENST00000557024 OR10W1Q8NGF6 305 aa6.89□□□□□ -1.31
SYNE2-224ENST00000557024 OR1L6Q8NGR2 347 aa6.89□□□□□ -1.31
SYNE2-224ENST00000557024 SMIM8Q96KF7 97 aa6.89□□□□□ -1.31
SYNE2-224ENST00000557024 STRAPQ9Y3F4 350 aaKnown RBP6.89□□□□□ -1.31
SYNE2-224ENST00000557024 CGB1A6NKQ9 187 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 TEX22C9J3V5 150 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 IFNA4P05014 189 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 AREGP15514 252 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 HIST1H1BP16401 226 aaKnown RBP6.88□□□□□ -1.31
SYNE2-224ENST00000557024 CTRB1P17538 263 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 CBLN1P23435 193 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 NPY1RP25929 384 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 TAS2R30P59541 319 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 ATP5G2Q06055 141 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 IL15RAQ13261 267 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 CTRB2Q6GPI1 263 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 TTC9CQ8N5M4 171 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 SLC24A4Q8NFF2 622 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 RNF183Q96D59 192 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 SLC25A31Q9H0C2 315 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 THYN1Q9P016 225 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 MBD2Q9UBB5 411 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 MLXQ9UH92 298 aa6.88□□□□□ -1.31
SYNE2-224ENST00000557024 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.87□□□□□ -1.31
SYNE2-224ENST00000557024 IGLC7A0M8Q6 106 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 FAM24AA6NFZ4 105 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 PRSS29PA6NIE9 313 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 FAM223BA6NKX1 122 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 NPIPB5A8MRT5 1133 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 INS-IGF2F8WCM5 200 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 H3BP45 60 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 CORTO00230 105 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 UBE2CO00762 179 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 TSC22D2O75157 780 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 OR2C1O95371 312 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 P2RY1P47900 373 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 ATP5IP56385 69 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-224ENST00000557024 WT1-ASQ06250 92 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 ODF1Q14990 250 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 C2orf83Q53S99 150 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 CT83Q5H943 113 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 ZNF546Q86UE3 836 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 STX12Q86Y82 276 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 FAM223AQ8IWN6 122 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 TCTE3Q8IZS6 198 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 STPG3Q8N7X2 389 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 INO80EQ8NBZ0 244 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-224ENST00000557024 C2CD4CQ8TF44 421 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 PINX1Q96BK5 328 aaKnown RBP6.87□□□□□ -1.31
SYNE2-224ENST00000557024 ST6GAL2Q96JF0 529 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 OR5AC2Q9NZP5 309 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 FAT2Q9NYQ8 4349 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
SYNE2-224ENST00000557024 TRAV14DV4A0A0A6YYC5 116 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 A0A1B0GW64 132 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 RPS10-NUDT3A0A1W2PQS6 291 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 ZNF320A2RRD8 509 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 TMEM213A2RRL7 107 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 SMLR1H3BR10 107 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 LGALS9O00182 355 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 CRYGCP07315 174 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 RNASE2P10153 161 aaKnown RBP6.86□□□□□ -1.31
SYNE2-224ENST00000557024 SLC25A4P12235 298 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 RPL35AP18077 110 aaKnown RBP6.86□□□□□ -1.31
SYNE2-224ENST00000557024 OPRK1P41145 380 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 ZFP69Q49AA0 526 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 OR8G2PQ6IF36 304 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 ETFRF1Q6IPR1 90 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 TEPPQ6URK8 271 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 BTNL8Q6UX41 500 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 OR10P1Q8NGE3 313 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 OR1P1Q8NH06 330 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 C11orf45Q8TAV5 145 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 RNF126Q9BV68 326 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 MFFQ9GZY8 342 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 LYRM2Q9NU23 88 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-224ENST00000557024 UBQLN2Q9UHD9 624 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 DMRT1Q9Y5R6 373 aa6.86□□□□□ -1.31
SYNE2-224ENST00000557024 F11RQ9Y624 299 aaKnown RBP6.86□□□□□ -1.31
SYNE2-224ENST00000557024 C15orf62A8K5M9 175 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 IGLL5B9A064 214 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 H0YIZ8 118 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 GGCTO75223 188 aaKnown RBP6.85□□□□□ -1.31
SYNE2-224ENST00000557024 OR2J3O76001 311 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 C1QBP02746 253 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 METTL15P1P0C7V9 234 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 RPL12P30050 165 aaKnown RBP6.85□□□□□ -1.31
SYNE2-224ENST00000557024 FCGR2BP31994 310 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-224ENST00000557024 AP2S1P53680 142 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-224ENST00000557024 PAX9P55771 341 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 HBG1P69891 147 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 HBG2P69892 147 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 C15orf32Q32M92 178 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms