RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 PLXNB1O43157 2135 aa4.09□□□□□ -1.76
ATXN3-244ENST00000556898 PRKDCP78527 4128 aaKnown RBP4.08□□□□□ -1.76
ATXN3-244ENST00000556898 IGKV1OR2-108A0A075B7D4 117 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 IGHV3OR16-8A0A075B7F1 116 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 IGHV3-35A0A0C4DH35 117 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 A0A0D9SG52 128 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 KANTRA0A1W2PQU2 76 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 GAGE12BA1L429 117 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 CLPSL1A2RUU4 121 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 GAGE12HA6NDE8 117 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 NDUFA7O95182 113 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 IGHG4P01861 327 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 EDN2P20800 178 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 MALP21145 153 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 FGF7P21781 194 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 PSMB8P28062 276 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 OR10J1P30954 320 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 GPR183P32249 361 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 GPX4P36969 197 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-244ENST00000556898 RND2P52198 227 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 PTTG1IPP53801 180 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 PROK1P58294 105 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 DLK1P80370 383 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF90Q03938 601 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 AKR1C1Q04828 323 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 ATP5G2Q06055 141 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 BAXQ07812 192 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 EXOSC2Q13868 293 aaKnown RBP4.08□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF345Q14585 488 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 VWC2Q2TAL6 325 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 KLK9Q2XQG4 91 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 DEFB136Q30KP8 78 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 C15orf32Q32M92 178 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 Q56UQ5 140 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 CLEC19AQ6UXS0 136 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF491Q8N8L2 437 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 HSD17B11Q8NBQ5 300 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 RNASEH2CQ8TDP1 164 aaKnown RBP4.08□□□□□ -1.76
ATXN3-244ENST00000556898 PCNPQ8WW12 178 aaKnown RBP4.08□□□□□ -1.76
ATXN3-244ENST00000556898 SLC35E1Q96K37 410 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 TMEM68Q96MH6 324 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 MGST2Q99735 147 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 RSG1Q9BU20 258 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 CHRDL1Q9BU40 450 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 TMEM147Q9BVK8 224 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF471Q9BX82 626 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-244ENST00000556898 WDR61Q9GZS3 305 aaKnown RBP4.08□□□□□ -1.76
ATXN3-244ENST00000556898 SH3BGRL3Q9H299 93 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 VSIRQ9H7M9 311 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 UQCC1Q9NVA1 299 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 CACFD1Q9UGQ2 172 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 KLK9Q9UKQ9 250 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 WDR83OSQ9Y284 106 aa4.08□□□□□ -1.76
ATXN3-244ENST00000556898 IGHV4OR15-8A0A075B7B6 117 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 A0A087WW49 117 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 OR2T8A6NH00 312 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 CLN5O75503 358 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 CLEC3BP05452 202 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 IGLC1P0CG04 106 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 HIST1H1BP16401 226 aaKnown RBP4.07□□□□□ -1.76
ATXN3-244ENST00000556898 ATP6V0CP27449 155 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 ELLP55199 621 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-244ENST00000556898 SLC35B1P78383 322 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 IFITM2Q01629 132 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 ATP6V1FQ16864 119 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 GCSAMLQ5JQS6 135 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 KHDC1LQ5JSQ8 128 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 MIC13Q5XKP0 118 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 TEX38Q6PEX7 206 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 BTNL8Q6UX41 500 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 NECAP1Q8NC96 275 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 OR4X2Q8NGF9 303 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 OR4X1Q8NH49 305 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF502Q8TBZ5 544 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 EEF1AKMT3Q96AZ1 226 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 PPP1R14BQ96C90 147 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 CITED2Q99967 270 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-244ENST00000556898 C21orf62Q9NYP8 219 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 DKK2Q9UBU2 259 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF580Q9UK33 172 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 SELENOKQ9Y6D0 94 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 TNCP24821 2201 aa4.07□□□□□ -1.76
ATXN3-244ENST00000556898 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.06□□□□□ -1.76
ATXN3-244ENST00000556898 RPS10-NUDT3A0A1W2PQS6 291 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 TCRBV4S1A1TA0A5B7 111 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 FAM223BA6NKX1 122 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 ZFP92A6NM28 416 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 H3BUA1 57 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 CORTO00230 105 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 TAAR5O14804 337 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 AGPAT2O15120 278 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 ZNF207O43670 478 aaKnown RBP4.06□□□□□ -1.76
ATXN3-244ENST00000556898 DFFBO76075 338 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 YIF1AO95070 293 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 SCAF4O95104 1147 aaKnown RBP4.06□□□□□ -1.76
ATXN3-244ENST00000556898 OR2C1O95371 312 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 BRI3O95415 125 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 IFNA5P01569 189 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 IGKV1-17P01599 117 aa4.06□□□□□ -1.76
ATXN3-244ENST00000556898 ELANEP08246 267 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms