RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 OR1L6Q8NGR2 347 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 OR1L8Q8NGR8 309 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 IL17DQ8TAD2 202 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 MARC2Q969Z3 335 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 MOB3AQ96BX8 217 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 SEC22AQ96IW7 307 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 SRSF8Q9BRL6 282 aaKnown RBP5.01□□□□□ -1.61
PSEN1-216ENST00000556066 RTBDNQ9BSG5 229 aaPredicted RBP5.01□□□□□ -1.61
PSEN1-216ENST00000556066 C20orf24Q9BUV8 137 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 VCX2Q9H322 139 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 C5orf66Q9H5L9 145 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 UFC1Q9Y3C8 167 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 OR51B2Q9Y5P1 312 aa5.01□□□□□ -1.61
PSEN1-216ENST00000556066 PLECQ15149 4684 aaKnown RBP5□□□□□ -1.61
PSEN1-216ENST00000556066 FXYD6-FXYD2A0A087WZ82 144 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 LOC102724200A0A096LPH7 203 aaPredicted RBP5□□□□□ -1.61
PSEN1-216ENST00000556066 HMSDA8MTL9 139 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 GPR31O00270 319 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 ZNF207O43670 478 aaKnown RBP5□□□□□ -1.61
PSEN1-216ENST00000556066 JTBO76095 146 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 SFT2D2O95562 160 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 PGAM2P15259 253 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 S100A1P23297 94 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 S100GP29377 79 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 MFAP2P55001 183 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 TIRAPP58753 221 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 KLK9Q2XQG4 91 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 Q56UQ5 140 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 THOC7Q6I9Y2 204 aaKnown RBP5□□□□□ -1.61
PSEN1-216ENST00000556066 TEX261Q6UWH6 196 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 TMUB2Q71RG4 321 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 HSD17B13Q7Z5P4 300 aaPredicted RBP5□□□□□ -1.61
PSEN1-216ENST00000556066 SLC38A6Q8IZM9 456 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 ZNF680Q8NEM1 530 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 VN1R17PQ8TDU5 208 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 MITD1Q8WV92 249 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 PCNPQ8WW12 178 aaKnown RBP5□□□□□ -1.61
PSEN1-216ENST00000556066 LSM10Q969L4 123 aaKnown RBP5□□□□□ -1.61
PSEN1-216ENST00000556066 GGTLC1Q9BX51 225 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 FXYD6Q9H0Q3 95 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 SLC25A32Q9H2D1 315 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 HRH4Q9H3N8 390 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 NDUFA4L2Q9NRX3 87 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 C21orf62Q9NYP8 219 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 MRPL27Q9P0M9 148 aaKnown RBP5□□□□□ -1.61
PSEN1-216ENST00000556066 UBQLN2Q9UHD9 624 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 KLK9Q9UKQ9 250 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 U3KQ87 197 aa5□□□□□ -1.61
PSEN1-216ENST00000556066 TRAV25A0A0B4J276 109 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 ARPC5O15511 151 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 YIF1AO95070 293 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 FGF2P09038 288 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 C8orf88P0DMB2 117 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 ELLP55199 621 aaPredicted RBP4.99□□□□□ -1.61
PSEN1-216ENST00000556066 UCP3P55916 312 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 SUPT4H1P63272 117 aaKnown RBP4.99□□□□□ -1.61
PSEN1-216ENST00000556066 TMEM128Q5BJH2 165 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 H2BFWTQ7Z2G1 175 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 SCARB1Q8WTV0 552 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 TMEM190Q8WZ59 177 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 BSCL2Q96G97 398 aaPredicted RBP4.99□□□□□ -1.61
PSEN1-216ENST00000556066 TMEM56Q96MV1 263 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 SCGB3A2Q96PL1 93 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 OVOL2Q9BRP0 275 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 CHRDL1Q9BU40 450 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 DAZ1Q9NQZ3 744 aaKnown RBP4.99□□□□□ -1.61
PSEN1-216ENST00000556066 FKBP11Q9NYL4 201 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 PRNDQ9UKY0 176 aa4.99□□□□□ -1.61
PSEN1-216ENST00000556066 F11RQ9Y624 299 aaKnown RBP4.99□□□□□ -1.61
PSEN1-216ENST00000556066 IGKV3-7A0A075B6H7 116 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 IGHV3-49A0A0A0MS15 119 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 A0A0B4J2A0 478 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 CXorf65A6NEN9 183 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 C15orf61A6NNL5 157 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 K7EIM0 57 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 NDUFA4O00483 81 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 NUPL2O15504 423 aaKnown RBP4.98□□□□□ -1.61
PSEN1-216ENST00000556066 ADAP1O75689 374 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 IGHV3-48P01763 117 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 CTSDP07339 412 aaPredicted RBP4.98□□□□□ -1.61
PSEN1-216ENST00000556066 RPL35AP18077 110 aaKnown RBP4.98□□□□□ -1.61
PSEN1-216ENST00000556066 S100A11P31949 105 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 CAMPP49913 170 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 AP2S1P53680 142 aaPredicted RBP4.98□□□□□ -1.61
PSEN1-216ENST00000556066 APOC4P55056 127 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 DEFB135Q30KP9 77 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 LRRC37A5PQ49AS3 106 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 LPCAT3Q6P1A2 487 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 SPSB3Q6PJ21 355 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 GSG1LQ6UXU4 331 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 TBC1D26Q86UD7 250 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 OR5B3Q8NH48 314 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 OR4A16Q8NH70 328 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 ASB13Q8WXK3 278 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 PINX1Q96BK5 328 aaKnown RBP4.98□□□□□ -1.61
PSEN1-216ENST00000556066 OR10C1Q96KK4 312 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 SPAG8Q99932 426 aaPredicted RBP4.98□□□□□ -1.61
PSEN1-216ENST00000556066 PDCD10Q9BUL8 212 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 MFFQ9GZY8 342 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 TMEM14BQ9NUH8 114 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms