RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 TENM1Q9UKZ4 2725 aa13.83□□□□□ -0.19
SHOX-204ENST00000554971 A0A1W2PPQ1 181 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 NPFFO15130 113 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 IL3RAP26951 378 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 PYY3Q5JQD4 70 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 TEX29Q8N6K0 151 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 NECAP1Q8NC96 275 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 OR10D4PQ8NGN7 298 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 OR10X1Q8NGY0 326 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 OR9G1Q8NH87 305 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 ST6GALNAC6Q969X2 333 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 NABP2Q9BQ15 211 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 MRPL32Q9BYC8 188 aaKnown RBP13.83□□□□□ -0.2
SHOX-204ENST00000554971 WASHC3Q9Y3C0 194 aa13.83□□□□□ -0.2
SHOX-204ENST00000554971 A0A0U1RQK1 487 aa13.82□□□□□ -0.2
SHOX-204ENST00000554971 LGALS7P47929 136 aa13.82□□□□□ -0.2
SHOX-204ENST00000554971 GAMTQ14353 236 aa13.82□□□□□ -0.2
SHOX-204ENST00000554971 HLA-DRB5Q30154 266 aa13.82□□□□□ -0.2
SHOX-204ENST00000554971 MRPL41Q8IXM3 137 aaKnown RBP13.82□□□□□ -0.2
SHOX-204ENST00000554971 OR5G3P0C626 314 aa13.82□□□□□ -0.2
SHOX-204ENST00000554971 FAM78BQ5VT40 261 aa13.82□□□□□ -0.2
SHOX-204ENST00000554971 DYNAPQ8N1N2 210 aa13.82□□□□□ -0.2
SHOX-204ENST00000554971 OR1P1Q8NH06 330 aa13.82□□□□□ -0.2
SHOX-204ENST00000554971 YTHDF2Q9Y5A9 579 aaKnown RBP13.82□□□□□ -0.2
SHOX-204ENST00000554971 BPIFB3P59826 476 aa13.81□□□□□ -0.2
SHOX-204ENST00000554971 OR10G8Q8NGN5 311 aa13.81□□□□□ -0.2
SHOX-204ENST00000554971 ELOVL1Q9BW60 279 aa13.81□□□□□ -0.2
SHOX-204ENST00000554971 SCO2A0A1W2PP80 73 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 DEFB112Q30KQ8 113 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 VMA21Q3ZAQ7 101 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 BEND2Q8NDZ0 799 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 PFDN5Q99471 154 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 MYOD1P15172 320 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 HIST1H1BP16401 226 aaKnown RBP13.8□□□□□ -0.2
SHOX-204ENST00000554971 OR10J1P30954 320 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 GFI1BQ5VTD9 330 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 TEX38Q6PEX7 206 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 OCC1Q8TAD7 63 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 HIST1H2BLQ99880 126 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 DERL1Q9BUN8 251 aa13.8□□□□□ -0.2
SHOX-204ENST00000554971 A0A1W2PRE2 83 aa13.79□□□□□ -0.2
SHOX-204ENST00000554971 SPATA31B1PQ5VZV4 182 aa13.79□□□□□ -0.2
SHOX-204ENST00000554971 MIR17HGQ75NE6 70 aa13.79□□□□□ -0.2
SHOX-204ENST00000554971 TGIF2LXQ8IUE1 241 aa13.79□□□□□ -0.2
SHOX-204ENST00000554971 PACRGQ96M98 296 aaPredicted RBP13.79□□□□□ -0.2
SHOX-204ENST00000554971 TRBV20OR9-2A0A075B6H5 130 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 XKRY2A2RUG3 117 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 LY6LH3BQJ8 138 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 C8orf88P0DMB2 117 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 FABP4P15090 132 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 SELENOTP62341 195 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 RPL19P84098 196 aaKnown RBP13.78□□□□□ -0.2
SHOX-204ENST00000554971 DIAPH2-AS1Q14236 149 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 PSG5Q15238 335 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 SGMS2Q8NHU3 365 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 PRDM13Q9H4Q3 707 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 IGKV1OR2-108A0A075B7D4 117 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 LINC00587B1AMM8 73 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 BUB1B-PAK6H3BSN5 160 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 OR10J4P0C629 311 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 RPL15P61313 204 aaKnown RBP13.78□□□□□ -0.2
SHOX-204ENST00000554971 ETFRF1Q6IPR1 90 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 SIGLECL1Q8N7X8 197 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 TEX45Q8NA69 505 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 OR5T1Q8NG75 326 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 OR1L4Q8NGR5 311 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 OR5R1Q8NH85 324 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 SLC25A33Q9BSK2 321 aa13.78□□□□□ -0.2
SHOX-204ENST00000554971 ZNF320A2RRD8 509 aa13.77□□□□□ -0.21
SHOX-204ENST00000554971 IGLV2-23P01705 113 aa13.77□□□□□ -0.21
SHOX-204ENST00000554971 YPEL3P61236 119 aaPredicted RBP13.77□□□□□ -0.21
SHOX-204ENST00000554971 ZNF114Q8NC26 417 aa13.77□□□□□ -0.21
SHOX-204ENST00000554971 DNAJC4Q9NNZ3 241 aa13.77□□□□□ -0.21
SHOX-204ENST00000554971 ESM1Q9NQ30 184 aa13.77□□□□□ -0.21
SHOX-204ENST00000554971 IL36BQ9NZH7 164 aa13.77□□□□□ -0.21
SHOX-204ENST00000554971 TBL2Q9Y4P3 447 aaKnown RBP13.77□□□□□ -0.21
SHOX-204ENST00000554971 STAB1Q9NY15 2570 aa13.77□□□□□ -0.21
SHOX-204ENST00000554971 HTR1DP28221 377 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 PRRX1P54821 245 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 LGALS4P56470 323 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 EAF1Q96JC9 268 aaPredicted RBP13.76□□□□□ -0.21
SHOX-204ENST00000554971 HILPDAQ9Y5L2 63 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 TRAPPC1Q9Y5R8 145 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 HELTA6NFD8 242 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 CNN1P51911 297 aaKnown RBP13.76□□□□□ -0.21
SHOX-204ENST00000554971 MINOS1Q5TGZ0 78 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 PVRIGQ6DKI7 326 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 THAP8Q8NA92 274 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 OR10W1Q8NGF6 305 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 DPM3Q9P2X0 92 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 MINOS1-NBL1R4GNA1 71 aa13.76□□□□□ -0.21
SHOX-204ENST00000554971 JOSD1Q15040 202 aaPredicted RBP13.75□□□□□ -0.21
SHOX-204ENST00000554971 COX19Q49B96 90 aa13.75□□□□□ -0.21
SHOX-204ENST00000554971 PRIMA1Q86XR5 153 aa13.75□□□□□ -0.21
SHOX-204ENST00000554971 MEGF9Q9H1U4 602 aa13.75□□□□□ -0.21
SHOX-204ENST00000554971 ZNF430Q9H8G1 570 aaPredicted RBP13.75□□□□□ -0.21
SHOX-204ENST00000554971 PSMB11A5LHX3 300 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 ACTL6BO94805 426 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 GCGP01275 180 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 COMPP49747 757 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms