RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 C2orf70A6NJV1 201 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 GGCTO75223 188 aaKnown RBP10.1□□□□□ -0.79
NUP188-211ENST00000550219 FOLR2P14207 255 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 ARL3P36405 182 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 NUP62P37198 522 aaPredicted RBP10.1□□□□□ -0.79
NUP188-211ENST00000550219 HBG1P69891 147 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 HBG2P69892 147 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 SLC38A11Q08AI6 406 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 ATP6V1FQ16864 119 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 CLEC19AQ6UXS0 136 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 TMEM217Q8N7C4 229 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 INO80EQ8NBZ0 244 aaPredicted RBP10.1□□□□□ -0.79
NUP188-211ENST00000550219 HYLS1Q96M11 299 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 SRD5A3Q9H8P0 318 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 ZC4H2Q9NQZ6 224 aa10.1□□□□□ -0.79
NUP188-211ENST00000550219 PFDN1O60925 122 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 CLN5O75503 358 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 IGHV3-48P01763 117 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 NPBWR1P48145 328 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 OR2F1Q13607 317 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 ZNF345Q14585 488 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 TMEM144Q7Z5S9 345 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 THAP8Q8NA92 274 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 OR1S2Q8NGQ3 325 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 OR5C1Q8NGR4 320 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 NPIPB3Q92617 1050 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 SLC35E1Q96K37 410 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 TMEM147Q9BVK8 224 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 MFFQ9GZY8 342 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 DNAH7Q8WXX0 4024 aa10.09□□□□□ -0.79
NUP188-211ENST00000550219 ZNF320A2RRD8 509 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 ZNF785A8K8V0 405 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 OR11H12B2RN74 326 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 ARPC5O15511 151 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 CLEC3BP05452 202 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 CTSGP08311 255 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 RND2P52198 227 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 DEFB114Q30KQ6 69 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 ZFP69Q49AA0 526 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 KCNRGQ8N5I3 272 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 NPVFQ9HCQ7 196 aa10.08□□□□□ -0.8
NUP188-211ENST00000550219 TENM2Q9NT68 2774 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 IGKV1D-37A0A075B6S9 117 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 IGKV1OR2-108A0A075B7D4 117 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 TRAV30A0A087WSZ9 112 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 A0A0D9SG52 128 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 RBMY1BA6NDE4 496 aaKnown RBP10.07□□□□□ -0.8
NUP188-211ENST00000550219 RBMY1EA6NEQ0 496 aaKnown RBP10.07□□□□□ -0.8
NUP188-211ENST00000550219 IGKV1-17P01599 117 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 RBMY1DP0C7P1 496 aaKnown RBP10.07□□□□□ -0.8
NUP188-211ENST00000550219 IGLC1P0CG04 106 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 CXCL2P19875 107 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 GPR183P32249 361 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 ADMP35318 185 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 Q56UQ5 140 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 SPSB3Q6PJ21 355 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 LILRB2Q8N423 598 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 ACY3Q96HD9 319 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 ZNF414Q96IQ9 312 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 ATP5SQ99766 215 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 WFDC1Q9HC57 220 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 UQCC1Q9NVA1 299 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 FBXL17Q9UF56 701 aa10.07□□□□□ -0.8
NUP188-211ENST00000550219 TMEM213A2RRL7 107 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 OR2T8A6NH00 312 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 LGALS9O00182 355 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 TGOLN2O43493 480 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 GNG7O60262 68 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 DFFBO76075 338 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 CLINT1Q14677 625 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 LGALSLQ3ZCW2 172 aaPredicted RBP10.06□□□□□ -0.8
NUP188-211ENST00000550219 BTNL8Q6UX41 500 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 LINC00322Q6ZN03 302 aaPredicted RBP10.06□□□□□ -0.8
NUP188-211ENST00000550219 TMEM61Q8N0U2 210 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 TRGV9Q99603 122 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 CHRDL1Q9BU40 450 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 PARD6GQ9BYG4 376 aaPredicted RBP10.06□□□□□ -0.8
NUP188-211ENST00000550219 TECRQ9NZ01 308 aaKnown RBP10.06□□□□□ -0.8
NUP188-211ENST00000550219 WDR83OSQ9Y284 106 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 RYR2Q92736 4967 aa10.06□□□□□ -0.8
NUP188-211ENST00000550219 IGHV3-35A0A0C4DH35 117 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 TAAR5O14804 337 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 NUPL2O15504 423 aaKnown RBP10.05□□□□□ -0.8
NUP188-211ENST00000550219 JTBO76095 146 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 CBLN1P23435 193 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 OR10J1P30954 320 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 EIF2B2P49770 351 aaKnown RBP10.05□□□□□ -0.8
NUP188-211ENST00000550219 AP2S1P53680 142 aaPredicted RBP10.05□□□□□ -0.8
NUP188-211ENST00000550219 AKR1C1Q04828 323 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 FAM106AQ4KMX7 169 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 LAMTOR1Q6IAA8 161 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 TEPPQ6URK8 271 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 GPHB5Q86YW7 130 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 UBAC2Q8NBM4 344 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 SMIM3Q9BZL3 60 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 MLXQ9UH92 298 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 SACSQ9NZJ4 4579 aa10.05□□□□□ -0.8
NUP188-211ENST00000550219 SMCO3A2RU48 225 aa10.04□□□□□ -0.8
NUP188-211ENST00000550219 A8MWP6 167 aa10.04□□□□□ -0.8
NUP188-211ENST00000550219 YPEL3P61236 119 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms