RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 WFDC5Q8TCV5 224 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 CANT1Q8WVQ1 401 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 BORCS5Q969J3 196 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 TCEAL4Q96EI5 215 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 HIST1H2BLQ99880 126 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 OR2J1Q9GZK6 312 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 MED11Q9P086 117 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 LAMTOR2Q9Y2Q5 125 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 NUBP2Q9Y5Y2 271 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 MED1Q15648 1581 aaPredicted RBP1.32□□□□□ -2.2
CCDC38-208ENST00000549876 ZNF106Q9H2Y7 1883 aaKnown RBP1.32□□□□□ -2.2
CCDC38-208ENST00000549876 ARHGEF10O15013 1369 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 CPDO75976 1380 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 ARHGAP32A7KAX9 2087 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 ARAP1Q96P48 1450 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 ECM29Q5VYK3 1845 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 MYH7BA7E2Y1 1941 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 PEG3Q9GZU2 1588 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 IGLV3-9A0A075B6K5 115 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 TRGV4A0A0C4DH28 118 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 A0A0G2JQZ4 141 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 A0A1B0GX51 115 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 C7orf71A4D174 169 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 EFCAB10A6NFE3 127 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 TLCD2A6NGC4 264 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 ZNF705FA8MVS1 300 aaPredicted RBP1.31□□□□□ -2.2
CCDC38-208ENST00000549876 J3QQQ9 107 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 NAPSAO96009 420 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 CSN2P05814 226 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 DBIP07108 87 aaKnown RBP1.31□□□□□ -2.2
CCDC38-208ENST00000549876 TRGC1P0CF51 173 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 RNASE4P34096 147 aaKnown RBP1.31□□□□□ -2.2
CCDC38-208ENST00000549876 SRP14P37108 136 aaKnown RBP1.31□□□□□ -2.2
CCDC38-208ENST00000549876 RPL26P61254 145 aaKnown RBP1.31□□□□□ -2.2
CCDC38-208ENST00000549876 ZNF181Q2M3W8 571 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 KHDC3LQ587J8 217 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 BRMS1LQ5PSV4 323 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 BCL2L15Q5TBC7 163 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 LCN15Q6UWW0 184 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 DHFR2Q86XF0 187 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 OR5A1Q8NGJ0 315 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 THEM6Q8WUY1 208 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 LZICQ8WZA0 190 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 RMND5BQ96G75 393 aaPredicted RBP1.31□□□□□ -2.2
CCDC38-208ENST00000549876 TEX37Q96LM6 180 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 PAIP2BQ9ULR5 123 aaKnown RBP1.31□□□□□ -2.2
CCDC38-208ENST00000549876 RPL26L1Q9UNX3 145 aaKnown RBP1.31□□□□□ -2.2
CCDC38-208ENST00000549876 BAIAP2Q9UQB8 552 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 ADAMTS7Q9UKP4 1686 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 MALRD1Q5VYJ5 2156 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 LTBP2Q14767 1821 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 NCAPD3P42695 1498 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 CAMSAP2Q08AD1 1489 aa1.31□□□□□ -2.2
CCDC38-208ENST00000549876 DENND4CQ5VZ89 1909 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 SMARCA4P51532 1647 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 COL4A2P08572 1712 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 TRGV10A0A0A0MS01 117 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 M0R378 163 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 DEGS1O15121 323 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 BCL2P10415 239 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 UBE2BP63146 152 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 PLCXD2Q0VAA5 305 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 LTC4SQ16873 150 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 TPRXLQ17RH7 258 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 CCDC153Q494R4 210 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 C22orf39Q6P5X5 142 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 OR4E2Q8NGC2 313 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 OR8B3Q8NGG8 313 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 STAG3L4Q8TBR4 150 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 DCANP1Q8TF63 244 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 CCDC115Q96NT0 180 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 TIMM21Q9BVV7 248 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 TMEM126AQ9H061 195 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 NHP2Q9NX24 153 aaKnown RBP1.3□□□□□ -2.2
CCDC38-208ENST00000549876 RASL12Q9NYN1 266 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 JPT1Q9UK76 154 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 PCTPQ9UKL6 214 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 ASB4Q9Y574 426 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 OBSL1O75147 1896 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 GREB1Q4ZG55 1949 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 RTEL1-TNFRSF6BF6WH68 1400 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 ADGRB3O60242 1522 aa1.3□□□□□ -2.2
CCDC38-208ENST00000549876 MYH10P35580 1976 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 H3BRN7 92 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 J3KT08 172 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 SDCBPO00560 298 aaPredicted RBP1.29□□□□□ -2.2
CCDC38-208ENST00000549876 ARPC5O15511 151 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 CST8O60676 142 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 PGLYRP1O75594 196 aaPredicted RBP1.29□□□□□ -2.2
CCDC38-208ENST00000549876 TRGC2P03986 189 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 SHBGP04278 402 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 CTSDP07339 412 aaPredicted RBP1.29□□□□□ -2.2
CCDC38-208ENST00000549876 GPX2P18283 190 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 NFYBP25208 207 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 POLR2HP52434 150 aaKnown RBP1.29□□□□□ -2.2
CCDC38-208ENST00000549876 AQP4P55087 323 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 PSG9Q00887 426 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 HES1Q14469 280 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 ZNF345Q14585 488 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 NNATQ16517 81 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms