RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 NPPCP23582 126 aa13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 RRAS2P62070 204 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 TMEM252Q8N6L7 170 aa13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 RNF125Q96EQ8 232 aa13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 RNF2Q99496 336 aa13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 SPAG8Q99932 426 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 OR5AC2Q9NZP5 309 aa13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 SMCO3A2RU48 225 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 E5RGE8 158 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 H0YIZ8 118 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 RLN2P04090 185 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 PET100P0DJ07 73 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 CXCL3P19876 107 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 SULT1A1P50225 295 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 SLC38A11Q08AI6 406 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 GUCA2BQ16661 112 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 LAMTOR1Q6IAA8 161 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 RBPMS2Q6ZRY4 209 aaKnown RBP13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 GTSCR1Q86UQ5 136 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 Q8N1Y9 231 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 OR11H7Q8NGC8 314 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 ST8SIA2Q92186 375 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 MED28Q9H204 178 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 TMEM231Q9H6L2 316 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 U3KQE9 123 aa13.28□□□□□ -0.28
RAPGEF3-220ENST00000549347 IGHV3OR16-13A0A075B7E8 117 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 IGHV3-74A0A0B4J1X5 117 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 A0A1W2PS18 150 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 CST7O76096 145 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 CD5P06127 495 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 HNRNPCP07910 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 P2RY1P47900 373 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 FCN2Q15485 313 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 STX12Q86Y82 276 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 NARS2Q96I59 477 aaKnown RBP13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 NPVFQ9HCQ7 196 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 SMAD5-AS1Q9Y6J3 95 aa13.27□□□□□ -0.29
RAPGEF3-220ENST00000549347 MPC2O95563 127 aa13.26□□□□□ -0.29
RAPGEF3-220ENST00000549347 CFDP00746 253 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF3-220ENST00000549347 VWC2Q2TAL6 325 aa13.26□□□□□ -0.29
RAPGEF3-220ENST00000549347 RABAC1Q9UI14 185 aa13.26□□□□□ -0.29
RAPGEF3-220ENST00000549347 IGHV3-66A0A0C4DH42 116 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 NUP62P37198 522 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 CD81P60033 236 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 HBG1P69891 147 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 HBG2P69892 147 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 OR2F1Q13607 317 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 DEFB121Q5J5C9 76 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 TEPPQ6URK8 271 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 CYP2G1PQ6ZSU1 146 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 TCF24Q7RTU0 167 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 LILRB2Q8N423 598 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 TMEM217Q8N7C4 229 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 NEURL2Q9BR09 285 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 RNF126Q9BV68 326 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 SLC25A31Q9H0C2 315 aa13.25□□□□□ -0.29
RAPGEF3-220ENST00000549347 CD7P09564 240 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 S100A11P31949 105 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 EIF2B2P49770 351 aaKnown RBP13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 LYZP61626 148 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 EWSR1Q01844 656 aaKnown RBP eCLIP13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 BAXQ07812 192 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 TMEM182Q6ZP80 229 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 BPIFCQ8NFQ6 507 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 GLMPQ8WWB7 406 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 ASB13Q8WXK3 278 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 GRAMD2BQ96HH9 432 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 PBDC1Q9BVG4 233 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 TMEM147Q9BVK8 224 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 UQCC1Q9NVA1 299 aa13.24□□□□□ -0.29
RAPGEF3-220ENST00000549347 OR4C46A6NHA9 309 aa13.23□□□□□ -0.29
RAPGEF3-220ENST00000549347 A8MZ25 164 aa13.23□□□□□ -0.29
RAPGEF3-220ENST00000549347 DFFBO76075 338 aa13.23□□□□□ -0.29
RAPGEF3-220ENST00000549347 LYL1P12980 280 aa13.23□□□□□ -0.29
RAPGEF3-220ENST00000549347 SELENOTP62341 195 aa13.23□□□□□ -0.29
RAPGEF3-220ENST00000549347 C16orf54Q6UWD8 224 aa13.23□□□□□ -0.29
RAPGEF3-220ENST00000549347 MBD2Q9UBB5 411 aa13.23□□□□□ -0.29
RAPGEF3-220ENST00000549347 SLC45A2Q9UMX9 530 aa13.23□□□□□ -0.29
RAPGEF3-220ENST00000549347 WDR83OSQ9Y284 106 aa13.23□□□□□ -0.29
RAPGEF3-220ENST00000549347 BUB3O43684 328 aa13.22□□□□□ -0.29
RAPGEF3-220ENST00000549347 GIPP09681 153 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF3-220ENST00000549347 IGHV4-30-4P0DP06 118 aa13.22□□□□□ -0.29
RAPGEF3-220ENST00000549347 GATA2P23769 480 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF3-220ENST00000549347 PLP1P60201 277 aa13.22□□□□□ -0.29
RAPGEF3-220ENST00000549347 ATP6V1FQ16864 119 aa13.22□□□□□ -0.29
RAPGEF3-220ENST00000549347 ZNF546Q86UE3 836 aa13.22□□□□□ -0.29
RAPGEF3-220ENST00000549347 B9D2Q9BPU9 175 aa13.22□□□□□ -0.29
RAPGEF3-220ENST00000549347 C19orf73Q9NVV2 129 aa13.22□□□□□ -0.29
RAPGEF3-220ENST00000549347 PFDN2Q9UHV9 154 aa13.22□□□□□ -0.29
RAPGEF3-220ENST00000549347 TRAV2A0A0B4J234 112 aa13.21□□□□□ -0.29
RAPGEF3-220ENST00000549347 UBE2L5PA0A1B0GUS4 154 aa13.21□□□□□ -0.29
RAPGEF3-220ENST00000549347 NHLH2Q02577 135 aa13.21□□□□□ -0.29
RAPGEF3-220ENST00000549347 STPG3Q8N7X2 389 aa13.21□□□□□ -0.29
RAPGEF3-220ENST00000549347 MGST2Q99735 147 aa13.21□□□□□ -0.29
RAPGEF3-220ENST00000549347 FAM110AQ9BQ89 295 aa13.21□□□□□ -0.29
RAPGEF3-220ENST00000549347 AGPAT2O15120 278 aa13.2□□□□□ -0.3
RAPGEF3-220ENST00000549347 LINC00869P0C866 280 aa13.2□□□□□ -0.3
RAPGEF3-220ENST00000549347 PAFAH1B2P68402 229 aa13.2□□□□□ -0.3
RAPGEF3-220ENST00000549347 OR5C1Q8NGR4 320 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms