RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ZNF491Q8N8L2 437 aa7.37□□□□□ -1.23
YBX3-215ENST00000544504 OR1L4Q8NGR5 311 aa7.37□□□□□ -1.23
YBX3-215ENST00000544504 RNF141Q8WVD5 230 aa7.37□□□□□ -1.23
YBX3-215ENST00000544504 TMED6Q8WW62 240 aa7.37□□□□□ -1.23
YBX3-215ENST00000544504 PFDN5Q99471 154 aa7.37□□□□□ -1.23
YBX3-215ENST00000544504 RNF2Q99496 336 aa7.37□□□□□ -1.23
YBX3-215ENST00000544504 RSG1Q9BU20 258 aa7.37□□□□□ -1.23
YBX3-215ENST00000544504 KLK15Q9H2R5 256 aa7.37□□□□□ -1.23
YBX3-215ENST00000544504 SLC39A9Q9NUM3 307 aa7.37□□□□□ -1.23
YBX3-215ENST00000544504 PXMP4Q9Y6I8 212 aa7.37□□□□□ -1.23
YBX3-215ENST00000544504 IGKV1D-37A0A075B6S9 117 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 IGKV1OR2-108A0A075B7D4 117 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 ELOA3CA0A087WX78 387 aaPredicted RBP7.36□□□□□ -1.23
YBX3-215ENST00000544504 OR2T8A6NH00 312 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 TEX46H3BTG2 121 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 IGKV1-17P01599 117 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 RPLP1P05386 114 aaKnown RBP7.36□□□□□ -1.23
YBX3-215ENST00000544504 CTSGP08311 255 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 LGALS1P09382 135 aaKnown RBP7.36□□□□□ -1.23
YBX3-215ENST00000544504 M6PRP20645 277 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 SULT1A2P50226 295 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 PROK1P58294 105 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 B2MP61769 119 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 PRR20EP86478 221 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 PRR20CP86479 221 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 PRR20DP86480 221 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 PRR20BP86481 221 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 PRR20AP86496 221 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 TMEM41BQ5BJD5 291 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 FFAR4Q5NUL3 377 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 C1QL4Q86Z23 238 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 STPG3Q8N7X2 389 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 OR51G1Q8NGK1 321 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 WIPF2Q8TF74 440 aaPredicted RBP7.36□□□□□ -1.23
YBX3-215ENST00000544504 GATAD1Q8WUU5 269 aa7.36□□□□□ -1.23
YBX3-215ENST00000544504 SAT2Q96F10 170 aaPredicted RBP7.36□□□□□ -1.23
YBX3-215ENST00000544504 MRPL36Q9P0J6 103 aaKnown RBP7.36□□□□□ -1.23
YBX3-215ENST00000544504 PEF1Q9UBV8 284 aaKnown RBP7.36□□□□□ -1.23
YBX3-215ENST00000544504 TENM3Q9P273 2699 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 F8W735 103 aaPredicted RBP7.35□□□□□ -1.23
YBX3-215ENST00000544504 BMPR1BO00238 502 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 RGS13O14921 159 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 COX7A2P2O60397 106 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 GGCTO75223 188 aaKnown RBP7.35□□□□□ -1.23
YBX3-215ENST00000544504 OR2C1O95371 312 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 LINC00869P0C866 280 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 ARL3P36405 182 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 PLP1P60201 277 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 RAB2AP61019 212 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 BLOC1S1P78537 153 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 TIGITQ495A1 244 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 KHDC1LQ5JSQ8 128 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 ALKAL2Q6UX46 152 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 TMEM182Q6ZP80 229 aaPredicted RBP7.35□□□□□ -1.23
YBX3-215ENST00000544504 C4orf3Q8WVX3 66 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 CCDC140Q96MF4 163 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 CITED1Q99966 193 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 SH3BGRL3Q9H299 93 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 GNB4Q9HAV0 340 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 TSSC4Q9Y5U2 329 aaPredicted RBP7.35□□□□□ -1.23
YBX3-215ENST00000544504 S4R3C0 116 aa7.35□□□□□ -1.23
YBX3-215ENST00000544504 A0A1W2PPV4 95 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 NUDT19A8MXV4 375 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 NDUFA4O00483 81 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 HYPMO75409 117 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 IGHV3-11P01762 117 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 IGHV3-23P01764 117 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 HSPB1P04792 205 aaKnown RBP7.34□□□□□ -1.23
YBX3-215ENST00000544504 PSG1P11464 419 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 ZP3P21754 424 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 ELLP55199 621 aaPredicted RBP7.34□□□□□ -1.23
YBX3-215ENST00000544504 RHOBP62745 196 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 DEFA5Q01523 94 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 ZNF90Q03938 601 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 KIAA0141Q14154 515 aaPredicted RBP7.34□□□□□ -1.23
YBX3-215ENST00000544504 FAM106AQ4KMX7 169 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 MIC13Q5XKP0 118 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 C10orf99Q6UWK7 81 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 OR10G4Q8NGN3 311 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 OR10G9Q8NGN4 311 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 OR10G7Q8NGN6 311 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 NARS2Q96I59 477 aaKnown RBP7.34□□□□□ -1.23
YBX3-215ENST00000544504 MRPL32Q9BYC8 188 aaKnown RBP7.34□□□□□ -1.23
YBX3-215ENST00000544504 ACTR3CQ9C0K3 210 aaPredicted RBP7.34□□□□□ -1.23
YBX3-215ENST00000544504 DNAJC4Q9NNZ3 241 aa7.34□□□□□ -1.23
YBX3-215ENST00000544504 ANKRD34BA5PLL1 514 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 ZNF705EA8MWA4 302 aaPredicted RBP7.33□□□□□ -1.24
YBX3-215ENST00000544504 HBE1P02100 147 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 ADMP35318 185 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 TAS2R45P59539 299 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 LYZP61626 148 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 RPEL1Q2QD12 228 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 C10orf113Q5VZT2 155 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 LCNL1Q6ZST4 164 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 GPHB5Q86YW7 130 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 FAM213BQ8TBF2 198 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 DPF1Q92782 380 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 RNF125Q96EQ8 232 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 CHRDL1Q9BU40 450 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 RPRMQ9NS64 109 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms