RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 PSG1P11464 419 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 PXDC1Q5TGL8 231 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 UNQ9165/PRO28630Q6UXU0 137 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 IL34Q6ZMJ4 242 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 S100A7AQ86SG5 101 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 TCTE3Q8IZS6 198 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 BPIFCQ8NFQ6 507 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 OR2K2Q8NGT1 345 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 NARS2Q96I59 477 aaKnown RBP9.28□□□□□ -0.92
DDX55-210ENST00000543016 METTL26Q96S19 204 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 C20orf24Q9BUV8 137 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 TMEM231Q9H6L2 316 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 SLC45A2Q9UMX9 530 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 WDR83OSQ9Y284 106 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 TRRAPQ9Y4A5 3859 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 IGKV1OR2-108A0A075B7D4 117 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 IGHV3-35A0A0C4DH35 117 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 A0A1W2PS18 150 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 HMSDA8MTL9 139 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 SAP30O75446 220 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 FOLR2P14207 255 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 CBLN1P23435 193 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 NPPCP23582 126 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 AP2S1P53680 142 aaPredicted RBP9.27□□□□□ -0.93
DDX55-210ENST00000543016 Q5BKY6 102 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 CYP2G1PQ6ZSU1 146 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 ATP5SQ99766 215 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 ZFAND3Q9H8U3 227 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 KCNIP2Q9NS61 270 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 TNFSF18Q9UNG2 199 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 RNF24Q9Y225 148 aa9.27□□□□□ -0.93
DDX55-210ENST00000543016 FXYD6-FXYD2A0A087WZ82 144 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 WI2-2373I1.2A0A1W2PRP0 233 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 G3V3Q6 166 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 IFNA5P01569 189 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 IL4P05112 153 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 IGLL1P15814 213 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 CRYBB3P26998 211 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 PLP1P60201 277 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 ZNF90Q03938 601 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 ZNF266Q14584 549 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 TM4SF20Q53R12 229 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 SAMD5Q5TGI4 173 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 BTNL8Q6UX41 500 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 AKAP14Q86UN6 197 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 RNF125Q96EQ8 232 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 ZNF414Q96IQ9 312 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 ST6GAL2Q96JF0 529 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 PARD6GQ9BYG4 376 aaPredicted RBP9.26□□□□□ -0.93
DDX55-210ENST00000543016 SMPXQ9UHP9 88 aa9.26□□□□□ -0.93
DDX55-210ENST00000543016 TRAV25A0A0B4J276 109 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 IGHV7-4-1A0A0J9YVY3 117 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 TAAR5O14804 337 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 AGPAT2O15120 278 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 IGLV1-51P01701 117 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 RPL29P47914 159 aaKnown RBP9.25□□□□□ -0.93
DDX55-210ENST00000543016 CAMLGP49069 296 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 OR2F1Q13607 317 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 ZNF345Q14585 488 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 CLINT1Q14677 625 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 ZNF709Q8N972 641 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 SCGB1C1Q8TD33 95 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 DYNLRB2Q8TF09 96 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 GRAMD2BQ96HH9 432 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 RABAC1Q9UI14 185 aa9.25□□□□□ -0.93
DDX55-210ENST00000543016 hCG_2014768A0A024R1R8 64 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 UBE2L5PA0A1B0GUS4 154 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 C17orf112F2Z3M2 114 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 HNRNPCP07910 306 aaKnown RBP eCLIP9.24□□□□□ -0.93
DDX55-210ENST00000543016 FGF7P21781 194 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 EIF2B2P49770 351 aaKnown RBP9.24□□□□□ -0.93
DDX55-210ENST00000543016 DEFB114Q30KQ6 69 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 KPRPQ5T749 579 aaPredicted RBP9.24□□□□□ -0.93
DDX55-210ENST00000543016 LAMTOR1Q6IAA8 161 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 Q6ZRG5 221 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 MGST2Q99735 147 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 NEURL2Q9BR09 285 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 RHPN1-AS1Q9BWJ2 59 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 WDR61Q9GZS3 305 aaKnown RBP9.24□□□□□ -0.93
DDX55-210ENST00000543016 MFFQ9GZY8 342 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 VSIRQ9H7M9 311 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 U3KQE9 123 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 DNHD1Q96M86 4753 aa9.24□□□□□ -0.93
DDX55-210ENST00000543016 ELOA3CA0A087WX78 387 aaPredicted RBP9.23□□□□□ -0.93
DDX55-210ENST00000543016 A0A0D9SG52 128 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 RNF222A6NCQ9 220 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 CHEK1O14757 476 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 ARPC5O15511 151 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 HYPMO75409 117 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 LINC00869P0C866 280 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 LYZP61626 148 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 EGFEM1PQ0D2K5 195 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 OPCMLQ14982 345 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 USF2Q15853 346 aaPredicted RBP9.23□□□□□ -0.93
DDX55-210ENST00000543016 OXLD1Q5BKU9 147 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 C1orf194Q5T5A4 169 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 LCN12Q6JVE5 192 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 ADAMTSL5Q6ZMM2 481 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 HYLS1Q96M11 299 aa9.23□□□□□ -0.93
DDX55-210ENST00000543016 NPCDR1Q9BY65 106 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms