RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 UHRF2Q96PU4 802 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 PFDN5Q99471 154 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 MRPL32Q9BYC8 188 aaKnown RBP7.5□□□□□ -1.21
PAAF1-209ENST00000540659 DNAJC4Q9NNZ3 241 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 TMEM160Q9NX00 188 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 TECRQ9NZ01 308 aaKnown RBP7.5□□□□□ -1.21
PAAF1-209ENST00000540659 FBXL7Q9UJT9 491 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 C2CD3Q4AC94 2353 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 SONP18583 2426 aaKnown RBP7.5□□□□□ -1.21
PAAF1-209ENST00000540659 NF1P21359 2839 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 TNCP24821 2201 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 PLXNB1O43157 2135 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.49□□□□□ -1.21
PAAF1-209ENST00000540659 PSMB11A5LHX3 300 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 C11orf94C9JXX5 98 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 NUPL2O15504 423 aaKnown RBP7.49□□□□□ -1.21
PAAF1-209ENST00000540659 GNG7O60262 68 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 IGHV4-59P01825 116 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 AMY1AP04745 511 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 FABP1P07148 127 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 OR10J4P0C629 311 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 IGLC1P0CG04 106 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 HIST1H1BP16401 226 aaKnown RBP7.49□□□□□ -1.21
PAAF1-209ENST00000540659 AKR1C3P42330 323 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 MFAP4P55083 255 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 TAS2R45P59539 299 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 CD81P60033 236 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 MEF2BQ02080 365 aaPredicted RBP7.49□□□□□ -1.21
PAAF1-209ENST00000540659 KRTAP1-1Q07627 177 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 ZNF674Q2M3X9 581 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 FAM209BQ5JX69 171 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 LINC00305Q7Z4B0 112 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 MS4A10Q96PG2 267 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 RNF2Q99496 336 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 SLC25A2Q9BXI2 301 aa7.49□□□□□ -1.21
PAAF1-209ENST00000540659 GAR1Q9NY12 217 aaKnown RBP7.49□□□□□ -1.21
PAAF1-209ENST00000540659 FN1P02751 2386 aaKnown RBP7.49□□□□□ -1.21
PAAF1-209ENST00000540659 NIPBLQ6KC79 2804 aaeCLIP7.48□□□□□ -1.21
PAAF1-209ENST00000540659 HIVEP2P31629 2446 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 TRAV41A0A0B4J266 112 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 FAM74A7A6NL05 159 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 LY6G6DO95868 133 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 C8orf88P0DMB2 117 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 PSG1P11464 419 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 SRP14P37108 136 aaKnown RBP7.48□□□□□ -1.21
PAAF1-209ENST00000540659 FAM74A3Q4VXF1 159 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 AWAT1Q58HT5 328 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 FAM90A2PQ658T7 463 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 Q71RC1 249 aaPredicted RBP7.48□□□□□ -1.21
PAAF1-209ENST00000540659 TMEM86BQ8N661 226 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 OR5AU1Q8NGC0 362 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 RPUSD4Q96CM3 377 aaKnown RBP7.48□□□□□ -1.21
PAAF1-209ENST00000540659 ZNF503Q96F45 646 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 C19orf24Q9BVV8 132 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 RPS10P5Q9NQ39 176 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 C21orf62Q9NYP8 219 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 RNF24Q9Y225 148 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 TMA7Q9Y2S6 64 aaKnown RBP7.48□□□□□ -1.21
PAAF1-209ENST00000540659 YTHDF2Q9Y5A9 579 aaKnown RBP7.48□□□□□ -1.21
PAAF1-209ENST00000540659 NAV3Q8IVL0 2385 aa7.48□□□□□ -1.21
PAAF1-209ENST00000540659 OR2T8A6NH00 312 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 H3BQ15 152 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 DNASE2O00115 360 aaPredicted RBP7.47□□□□□ -1.21
PAAF1-209ENST00000540659 CD5LO43866 347 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 HYPMO75409 117 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 SNRPCP09234 159 aaKnown RBP7.47□□□□□ -1.21
PAAF1-209ENST00000540659 RD3LP0DJH9 198 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 PYYP10082 97 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 TAGLN2P37802 199 aaKnown RBP7.47□□□□□ -1.21
PAAF1-209ENST00000540659 BLCAPP62952 87 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 UBE2L3P68036 154 aaKnown RBP7.47□□□□□ -1.21
PAAF1-209ENST00000540659 RHOGP84095 191 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 PMS2P11Q13670 270 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 TMEM88Q6PEY1 159 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 CBLN2Q8IUK8 224 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 OR51G1Q8NGK1 321 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 JMJD8Q96S16 334 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 TMEM167BQ9NRX6 74 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 HIGD1AQ9Y241 93 aa7.47□□□□□ -1.21
PAAF1-209ENST00000540659 ANK3Q12955 4377 aaKnown RBP7.47□□□□□ -1.21
PAAF1-209ENST00000540659 SVEP1Q4LDE5 3571 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 TRAV30A0A087WSZ9 112 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 ELOA3CA0A087WX78 387 aaPredicted RBP7.46□□□□□ -1.22
PAAF1-209ENST00000540659 ZNF727A8MUV8 499 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 TOMM40O96008 361 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 FSHBP01225 129 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 IL4P05112 153 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 IER3P46695 156 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 RPL15P61313 204 aaKnown RBP7.46□□□□□ -1.22
PAAF1-209ENST00000540659 C15orf32Q32M92 178 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 LEMD1Q68G75 181 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 PQLC2Q6ZP29 291 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 Q6ZS46 218 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 TVP23CQ96ET8 276 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 ZNF48Q96MX3 618 aaPredicted RBP7.46□□□□□ -1.22
PAAF1-209ENST00000540659 NOL4LQ96MY1 436 aaPredicted RBP7.46□□□□□ -1.22
PAAF1-209ENST00000540659 NIPSNAP3BQ9BS92 247 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 PAXXQ9BUH6 204 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 PARLQ9H300 379 aa7.46□□□□□ -1.22
PAAF1-209ENST00000540659 OR51M1Q9H341 326 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms