RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 TMEM41BQ5BJD5 291 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 TMEM128Q5BJH2 165 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 LYZL2Q7Z4W2 148 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 DCANP1Q8TF63 244 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 Q8WTZ3 238 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 SLC25A21Q9BQT8 299 aaPredicted RBP7.91□□□□□ -1.14
CCDC60-202ENST00000535685 C11orf68Q9H3H3 251 aaKnown RBP7.91□□□□□ -1.14
CCDC60-202ENST00000535685 MCUBQ9NWR8 336 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 V9GYH0 126 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 HYDINQ4G0P3 5121 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 IGKV3-7A0A075B6H7 116 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 SCO2A0A1W2PP80 73 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 HELTA6NFD8 242 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 FAM90A26D6RGX4 464 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 NXPH3O95157 252 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 TOMM40O96008 361 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 HNRNPCP07910 306 aaKnown RBP eCLIP7.9□□□□□ -1.14
CCDC60-202ENST00000535685 AKR1C4P17516 323 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 GPX4P36969 197 aaPredicted RBP7.9□□□□□ -1.14
CCDC60-202ENST00000535685 EIF2B2P49770 351 aaKnown RBP7.9□□□□□ -1.14
CCDC60-202ENST00000535685 AP2S1P53680 142 aaPredicted RBP7.9□□□□□ -1.14
CCDC60-202ENST00000535685 DEFB131AP59861 70 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 RBMS2Q15434 407 aaKnown RBP7.9□□□□□ -1.14
CCDC60-202ENST00000535685 ZNF79Q15937 498 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 CEMP1Q6PRD7 247 aaPredicted RBP7.9□□□□□ -1.14
CCDC60-202ENST00000535685 C16orf54Q6UWD8 224 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 CCDC190Q86UF4 302 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 TOMM5Q8N4H5 51 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 DTD1Q8TEA8 209 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 GLMPQ8WWB7 406 aa7.9□□□□□ -1.14
CCDC60-202ENST00000535685 RBM38Q9H0Z9 239 aaKnown RBP7.9□□□□□ -1.14
CCDC60-202ENST00000535685 IGHV3-66A0A0C4DH42 116 aa7.89□□□□□ -1.15
CCDC60-202ENST00000535685 IFNA10P01566 189 aa7.89□□□□□ -1.15
CCDC60-202ENST00000535685 PYDC2Q56P42 97 aa7.89□□□□□ -1.15
CCDC60-202ENST00000535685 MORN3Q6PF18 240 aaPredicted RBP7.89□□□□□ -1.15
CCDC60-202ENST00000535685 TRPT1Q86TN4 253 aaKnown RBP7.89□□□□□ -1.15
CCDC60-202ENST00000535685 FAM24BQ8N5W8 94 aa7.89□□□□□ -1.15
CCDC60-202ENST00000535685 NPIPB3Q92617 1050 aa7.89□□□□□ -1.15
CCDC60-202ENST00000535685 RARRES2Q99969 163 aa7.89□□□□□ -1.15
CCDC60-202ENST00000535685 RBKSQ9H477 322 aa7.89□□□□□ -1.15
CCDC60-202ENST00000535685 CXorf65A6NEN9 183 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 BUB3O43684 328 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 GIG44P09565 113 aaPredicted RBP7.88□□□□□ -1.15
CCDC60-202ENST00000535685 RD3LP0DJH9 198 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 SPP1P10451 314 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 S100A5P33763 92 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 NUP62P37198 522 aaPredicted RBP7.88□□□□□ -1.15
CCDC60-202ENST00000535685 UBE2MP61081 183 aaKnown RBP7.88□□□□□ -1.15
CCDC60-202ENST00000535685 USF2Q15853 346 aaPredicted RBP7.88□□□□□ -1.15
CCDC60-202ENST00000535685 OR8G2PQ6IF36 304 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 STHQ8IWL8 128 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 STXBP6Q8NFX7 210 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 OR11H2Q8NH07 326 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 LINC00476Q8WZB0 136 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 RABAC1Q9UI14 185 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 KLK5Q9Y337 293 aaPredicted RBP7.88□□□□□ -1.15
CCDC60-202ENST00000535685 TMED3Q9Y3Q3 217 aa7.88□□□□□ -1.15
CCDC60-202ENST00000535685 MED6O75586 246 aa7.87□□□□□ -1.15
CCDC60-202ENST00000535685 SFT2D2O95562 160 aa7.87□□□□□ -1.15
CCDC60-202ENST00000535685 CA1P00915 261 aaPredicted RBP7.87□□□□□ -1.15
CCDC60-202ENST00000535685 IL4P05112 153 aa7.87□□□□□ -1.15
CCDC60-202ENST00000535685 PSG1P11464 419 aa7.87□□□□□ -1.15
CCDC60-202ENST00000535685 GAMTQ14353 236 aa7.87□□□□□ -1.15
CCDC60-202ENST00000535685 LEMD1Q68G75 181 aa7.87□□□□□ -1.15
CCDC60-202ENST00000535685 OR51G1Q8NGK1 321 aa7.87□□□□□ -1.15
CCDC60-202ENST00000535685 OR1S1Q8NH92 325 aa7.87□□□□□ -1.15
CCDC60-202ENST00000535685 MFFQ9GZY8 342 aa7.87□□□□□ -1.15
CCDC60-202ENST00000535685 IGKV1D-37A0A075B6S9 117 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 NAP1L6A6NFF2 107 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 ZNF705EA8MWA4 302 aaPredicted RBP7.86□□□□□ -1.15
CCDC60-202ENST00000535685 IFNA4P05014 189 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 FABP1P07148 127 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 ZNF688P0C7X2 276 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 DHRS2Q13268 280 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 PMS2P11Q13670 270 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 SPANXN2Q5MJ10 180 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 C1orf194Q5T5A4 169 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 TMED4Q7Z7H5 227 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 PHLDA1Q8WV24 401 aaPredicted RBP7.86□□□□□ -1.15
CCDC60-202ENST00000535685 RNF125Q96EQ8 232 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 ACY3Q96HD9 319 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 CIB3Q96Q77 187 aaPredicted RBP7.86□□□□□ -1.15
CCDC60-202ENST00000535685 TRGV9Q99603 122 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 SRRQ9GZT4 340 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 HRH4Q9H3N8 390 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 NRN1Q9NPD7 142 aa7.86□□□□□ -1.15
CCDC60-202ENST00000535685 CFDP00746 253 aaPredicted RBP7.85□□□□□ -1.15
CCDC60-202ENST00000535685 SNRPD3P62318 126 aaKnown RBP7.85□□□□□ -1.15
CCDC60-202ENST00000535685 RAB11AP62491 216 aa7.85□□□□□ -1.15
CCDC60-202ENST00000535685 SRSF3P84103 164 aaKnown RBP7.85□□□□□ -1.15
CCDC60-202ENST00000535685 PPP1R1AQ13522 171 aa7.85□□□□□ -1.15
CCDC60-202ENST00000535685 SIGLEC15Q6ZMC9 328 aa7.85□□□□□ -1.15
CCDC60-202ENST00000535685 CENPSQ8N2Z9 138 aa7.85□□□□□ -1.15
CCDC60-202ENST00000535685 THAP8Q8NA92 274 aa7.85□□□□□ -1.15
CCDC60-202ENST00000535685 Q8NAQ8 132 aa7.85□□□□□ -1.15
CCDC60-202ENST00000535685 CSNK1G2-AS1Q8NCQ2 148 aa7.85□□□□□ -1.15
CCDC60-202ENST00000535685 SLC35E1Q96K37 410 aa7.85□□□□□ -1.15
CCDC60-202ENST00000535685 RAB40CQ96S21 281 aa7.85□□□□□ -1.15
CCDC60-202ENST00000535685 BIRC6Q9NR09 4857 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms