RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 BIRC6Q9NR09 4857 aa17.04■□□□□ 0.32
YIF1A-213ENST00000534374 CA1P00915 261 aaPredicted RBP17.04■□□□□ 0.32
YIF1A-213ENST00000534374 RAB11AP62491 216 aa17.04■□□□□ 0.32
YIF1A-213ENST00000534374 DHRS2Q13268 280 aa17.04■□□□□ 0.32
YIF1A-213ENST00000534374 PPP1R1AQ13522 171 aa17.04■□□□□ 0.32
YIF1A-213ENST00000534374 TMEM41BQ5BJD5 291 aa17.04■□□□□ 0.32
YIF1A-213ENST00000534374 CEMP1Q6PRD7 247 aaPredicted RBP17.04■□□□□ 0.32
YIF1A-213ENST00000534374 CIB3Q96Q77 187 aaPredicted RBP17.04■□□□□ 0.32
YIF1A-213ENST00000534374 PFDN2Q9UHV9 154 aa17.04■□□□□ 0.32
YIF1A-213ENST00000534374 ALMS1Q8TCU4 4167 aa17.03■□□□□ 0.32
YIF1A-213ENST00000534374 NAP1L6A6NFF2 107 aa17.03■□□□□ 0.32
YIF1A-213ENST00000534374 ZNF688P0C7X2 276 aa17.03■□□□□ 0.32
YIF1A-213ENST00000534374 PMS2P11Q13670 270 aa17.03■□□□□ 0.32
YIF1A-213ENST00000534374 TRPT1Q86TN4 253 aaKnown RBP17.03■□□□□ 0.32
YIF1A-213ENST00000534374 SLC35E1Q96K37 410 aa17.03■□□□□ 0.32
YIF1A-213ENST00000534374 ZFP92A6NM28 416 aa17.02■□□□□ 0.32
YIF1A-213ENST00000534374 NUP62P37198 522 aaPredicted RBP17.02■□□□□ 0.32
YIF1A-213ENST00000534374 RPP30P78346 268 aaKnown RBP17.02■□□□□ 0.32
YIF1A-213ENST00000534374 MORN3Q6PF18 240 aaPredicted RBP17.02■□□□□ 0.32
YIF1A-213ENST00000534374 RNF125Q96EQ8 232 aa17.02■□□□□ 0.32
YIF1A-213ENST00000534374 IGKV1D-37A0A075B6S9 117 aa17.01■□□□□ 0.31
YIF1A-213ENST00000534374 FABP1P07148 127 aa17.01■□□□□ 0.31
YIF1A-213ENST00000534374 SPP1P10451 314 aa17.01■□□□□ 0.31
YIF1A-213ENST00000534374 INPP1P49441 399 aa17.01■□□□□ 0.31
YIF1A-213ENST00000534374 BAK1Q16611 211 aa17.01■□□□□ 0.31
YIF1A-213ENST00000534374 OR8G2PQ6IF36 304 aa17.01■□□□□ 0.31
YIF1A-213ENST00000534374 C11orf68Q9H3H3 251 aaKnown RBP17.01■□□□□ 0.31
YIF1A-213ENST00000534374 KLK5Q9Y337 293 aaPredicted RBP17.01■□□□□ 0.31
YIF1A-213ENST00000534374 SNRPGP15A8MWD9 76 aa17■□□□□ 0.31
YIF1A-213ENST00000534374 SYNGR2O43760 224 aa17■□□□□ 0.31
YIF1A-213ENST00000534374 HOXB5P09067 269 aa17■□□□□ 0.31
YIF1A-213ENST00000534374 GIG44P09565 113 aaPredicted RBP17■□□□□ 0.31
YIF1A-213ENST00000534374 TRIQKQ629K1 86 aa17■□□□□ 0.31
YIF1A-213ENST00000534374 SIGLEC15Q6ZMC9 328 aa17■□□□□ 0.31
YIF1A-213ENST00000534374 RAB40CQ96S21 281 aa17■□□□□ 0.31
YIF1A-213ENST00000534374 NRN1Q9NPD7 142 aa17■□□□□ 0.31
YIF1A-213ENST00000534374 NDUFB6O95139 128 aa16.99■□□□□ 0.31
YIF1A-213ENST00000534374 IAPPP10997 89 aa16.99■□□□□ 0.31
YIF1A-213ENST00000534374 SNRPD3P62318 126 aaKnown RBP16.99■□□□□ 0.31
YIF1A-213ENST00000534374 ZNF90Q03938 601 aa16.99■□□□□ 0.31
YIF1A-213ENST00000534374 GGNBP1Q5YKI7 109 aa16.99■□□□□ 0.31
YIF1A-213ENST00000534374 TRGV9Q99603 122 aa16.99■□□□□ 0.31
YIF1A-213ENST00000534374 C9orf170A2RU37 121 aa16.98■□□□□ 0.31
YIF1A-213ENST00000534374 KNCNA6PVL3 124 aa16.98■□□□□ 0.31
YIF1A-213ENST00000534374 ACTL10Q5JWF8 245 aa16.98■□□□□ 0.31
YIF1A-213ENST00000534374 PSMG4Q5JS54 123 aa16.97■□□□□ 0.31
YIF1A-213ENST00000534374 C1orf194Q5T5A4 169 aa16.97■□□□□ 0.31
YIF1A-213ENST00000534374 THAP8Q8NA92 274 aa16.97■□□□□ 0.31
YIF1A-213ENST00000534374 SDHCQ99643 169 aaPredicted RBP16.97■□□□□ 0.31
YIF1A-213ENST00000534374 PBDC1Q9BVG4 233 aa16.97■□□□□ 0.31
YIF1A-213ENST00000534374 MFFQ9GZY8 342 aa16.97■□□□□ 0.31
YIF1A-213ENST00000534374 MAGT1Q9H0U3 335 aa16.97■□□□□ 0.31
YIF1A-213ENST00000534374 CENPXA8MT69 81 aa16.96■□□□□ 0.31
YIF1A-213ENST00000534374 WRBO00258 174 aa16.96■□□□□ 0.31
YIF1A-213ENST00000534374 CFDP00746 253 aaPredicted RBP16.96■□□□□ 0.31
YIF1A-213ENST00000534374 ID3Q02535 119 aa16.96■□□□□ 0.31
YIF1A-213ENST00000534374 C11orf45Q8TAV5 145 aa16.96■□□□□ 0.31
YIF1A-213ENST00000534374 PHLDA1Q8WV24 401 aaPredicted RBP16.96■□□□□ 0.31
YIF1A-213ENST00000534374 LINC00476Q8WZB0 136 aa16.96■□□□□ 0.31
YIF1A-213ENST00000534374 C7orf50Q9BRJ6 194 aaKnown RBP16.96■□□□□ 0.31
YIF1A-213ENST00000534374 PAIP2BQ9ULR5 123 aaKnown RBP16.96■□□□□ 0.31
YIF1A-213ENST00000534374 PRSS46E5RG02 174 aa16.95■□□□□ 0.3
YIF1A-213ENST00000534374 COQ8AQ8NI60 647 aa16.95■□□□□ 0.3
YIF1A-213ENST00000534374 NDUFA13Q9P0J0 144 aa16.95■□□□□ 0.3
YIF1A-213ENST00000534374 FBXL17Q9UF56 701 aa16.95■□□□□ 0.3
YIF1A-213ENST00000534374 IGKV1OR2-108A0A075B7D4 117 aa16.94■□□□□ 0.3
YIF1A-213ENST00000534374 OR4E1P0C645 316 aa16.94■□□□□ 0.3
YIF1A-213ENST00000534374 CNPY1Q3B7I2 92 aa16.94■□□□□ 0.3
YIF1A-213ENST00000534374 FLVCR2Q9UPI3 526 aa16.94■□□□□ 0.3
YIF1A-213ENST00000534374 ZNF705EA8MWA4 302 aaPredicted RBP16.93■□□□□ 0.3
YIF1A-213ENST00000534374 IFNA21P01568 189 aa16.93■□□□□ 0.3
YIF1A-213ENST00000534374 NKX2-1P43699 371 aaPredicted RBP16.93■□□□□ 0.3
YIF1A-213ENST00000534374 LYZP61626 148 aa16.93■□□□□ 0.3
YIF1A-213ENST00000534374 NUTF2P61970 127 aaKnown RBP16.93■□□□□ 0.3
YIF1A-213ENST00000534374 SPANXN5Q5MJ07 72 aa16.93■□□□□ 0.3
YIF1A-213ENST00000534374 CSNK1G2-AS1Q8NCQ2 148 aa16.93■□□□□ 0.3
YIF1A-213ENST00000534374 STRAPQ9Y3F4 350 aaKnown RBP16.93■□□□□ 0.3
YIF1A-213ENST00000534374 H3BMM0 161 aa16.92■□□□□ 0.3
YIF1A-213ENST00000534374 ADAP1O75689 374 aa16.92■□□□□ 0.3
YIF1A-213ENST00000534374 MIFP14174 115 aa16.92■□□□□ 0.3
YIF1A-213ENST00000534374 C4BPBP20851 252 aa16.92■□□□□ 0.3
YIF1A-213ENST00000534374 NANOS2P60321 138 aaKnown RBP16.92■□□□□ 0.3
YIF1A-213ENST00000534374 OR2F1Q13607 317 aa16.92■□□□□ 0.3
YIF1A-213ENST00000534374 Q8NAQ8 132 aa16.92■□□□□ 0.3
YIF1A-213ENST00000534374 SLC45A2Q9UMX9 530 aa16.92■□□□□ 0.3
YIF1A-213ENST00000534374 LINC00854A0A1B0GVQ3 168 aa16.91■□□□□ 0.3
YIF1A-213ENST00000534374 BTCP35070 178 aa16.91■□□□□ 0.3
YIF1A-213ENST00000534374 ID1P41134 155 aa16.91■□□□□ 0.3
YIF1A-213ENST00000534374 C1QTNF4Q9BXJ3 329 aa16.91■□□□□ 0.3
YIF1A-213ENST00000534374 HRH4Q9H3N8 390 aa16.91■□□□□ 0.3
YIF1A-213ENST00000534374 DEFB4AO15263 64 aa16.9■□□□□ 0.3
YIF1A-213ENST00000534374 LY6G6CO95867 125 aa16.9■□□□□ 0.3
YIF1A-213ENST00000534374 IL7P13232 177 aa16.9■□□□□ 0.3
YIF1A-213ENST00000534374 OR8I2Q8N0Y5 310 aa16.9■□□□□ 0.3
YIF1A-213ENST00000534374 OR4D5Q8NGN0 318 aa16.9■□□□□ 0.3
YIF1A-213ENST00000534374 PPP1R14BQ96C90 147 aa16.9■□□□□ 0.3
YIF1A-213ENST00000534374 HLA-DRB4P13762 266 aa16.89■□□□□ 0.29
YIF1A-213ENST00000534374 POLR2GP62487 172 aaKnown RBP eCLIP16.89■□□□□ 0.29
YIF1A-213ENST00000534374 C4orf46Q504U0 113 aa16.89■□□□□ 0.29
YIF1A-213ENST00000534374 SAMD13Q5VXD3 122 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms