RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 MORN3Q6PF18 240 aaPredicted RBP6.37□□□□□ -1.39
USF1-210ENST00000531842 ZFAND1Q8TCF1 268 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 TMEM222Q9H0R3 208 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 SRRM2Q9UQ35 2752 aaKnown RBP6.36□□□□□ -1.39
USF1-210ENST00000531842 IGHV3OR16-12A0A075B7B8 117 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 TRAV30A0A087WSZ9 112 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 RPS10-NUDT3A0A1W2PQS6 291 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 ZNF701M0R085 212 aaPredicted RBP6.36□□□□□ -1.39
USF1-210ENST00000531842 IGKV3-20P01619 116 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 RNASE2P10153 161 aaKnown RBP6.36□□□□□ -1.39
USF1-210ENST00000531842 SPP1P10451 314 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 DHRS2Q13268 280 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 MEF2DQ14814 521 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 SURF2Q15527 256 aaPredicted RBP6.36□□□□□ -1.39
USF1-210ENST00000531842 BAK1Q16611 211 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 TIGITQ495A1 244 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 PSMG4Q5JS54 123 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 SELENOHQ8IZQ5 122 aaKnown RBP6.36□□□□□ -1.39
USF1-210ENST00000531842 CCDC71LQ8N9Z2 235 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 OR4X1Q8NH49 305 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 DCANP1Q8TF63 244 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 Q8WTZ3 238 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 TMEM170AQ8WVE7 144 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 SRRQ9GZT4 340 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 NAA60Q9H7X0 242 aa6.36□□□□□ -1.39
USF1-210ENST00000531842 HEYLQ9NQ87 328 aaPredicted RBP6.36□□□□□ -1.39
USF1-210ENST00000531842 TEX13DA0A0J9YY54 714 aaPredicted RBP6.35□□□□□ -1.39
USF1-210ENST00000531842 HELTA6NFD8 242 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 DISC1C4P0D8 188 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 INS-IGF2F8WCM5 200 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 CRYBB3P26998 211 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 HTR2BP41595 481 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 AP2S1P53680 142 aaPredicted RBP6.35□□□□□ -1.39
USF1-210ENST00000531842 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 SPCS3P61009 180 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 BSXQ3C1V8 233 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 GDF5OSQ5U4N7 250 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 TMEM88Q6PEY1 159 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 SPATA12Q7Z6I5 190 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 GPR146Q96CH1 333 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 RAB40CQ96S21 281 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 FNDC4Q9H6D8 234 aaPredicted RBP6.35□□□□□ -1.39
USF1-210ENST00000531842 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.35□□□□□ -1.39
USF1-210ENST00000531842 RABL2AQ9UBK7 228 aaPredicted RBP6.35□□□□□ -1.39
USF1-210ENST00000531842 RABL2BQ9UNT1 228 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 TMEM56-RWDD3S4R434 201 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 FAT1Q14517 4588 aa6.35□□□□□ -1.39
USF1-210ENST00000531842 CCDC160A6NGH7 325 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 CEBPZOSA8MTT3 80 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 NOL3O60936 208 aaKnown RBP6.34□□□□□ -1.39
USF1-210ENST00000531842 IGKV1-17P01599 117 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 PRM2P04554 102 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 HNRNPCP07910 306 aaKnown RBP eCLIP6.34□□□□□ -1.39
USF1-210ENST00000531842 OR10J1P30954 320 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 RND2P52198 227 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 NUTF2P61970 127 aaKnown RBP6.34□□□□□ -1.39
USF1-210ENST00000531842 SNRPD3P62318 126 aaKnown RBP6.34□□□□□ -1.39
USF1-210ENST00000531842 DHODHQ02127 395 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 PYDC2Q56P42 97 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 SOHLH1Q5JUK2 328 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 FAM222AQ5U5X8 452 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 OR1S2Q8NGQ3 325 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 PRRT1Q99946 306 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 C14orf166Q9Y224 244 aaKnown RBP6.34□□□□□ -1.39
USF1-210ENST00000531842 VPS13BQ7Z7G8 4022 aa6.34□□□□□ -1.39
USF1-210ENST00000531842 B3GALNT1O75752 331 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 SLC25A4P12235 298 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 NPY1RP25929 384 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 BTCP35070 178 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 NMSQ5H8A3 153 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 TMEM268Q5VZI3 342 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 PRSS54Q6PEW0 395 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 LYZL2Q7Z4W2 148 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 FAM219AQ8IW50 185 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 OR52E5Q8NH55 327 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 RBPMSQ93062 196 aaKnown RBP6.33□□□□□ -1.4
USF1-210ENST00000531842 ACY3Q96HD9 319 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 MCUBQ9NWR8 336 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 CACNG5Q9UF02 275 aa6.33□□□□□ -1.4
USF1-210ENST00000531842 NXPH3O95157 252 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 IL4P05112 153 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 IGLC1P0CG04 106 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 SPART-AS1P0CW21 52 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 RD3LP0DJH9 198 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 CCR6P51684 374 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 YPEL3P61236 119 aaPredicted RBP6.32□□□□□ -1.4
USF1-210ENST00000531842 ETFRF1Q6IPR1 90 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 C16orf54Q6UWD8 224 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 NOXA1Q86UR1 476 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 C6orf223Q8N319 242 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 SLC24A4Q8NFF2 622 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 RNASEH2CQ8TDP1 164 aaKnown RBP6.32□□□□□ -1.4
USF1-210ENST00000531842 NPIPB3Q92617 1050 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 C1QTNF4Q9BXJ3 329 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 KRTAP1-5Q9BYS1 174 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 DKK2Q9UBU2 259 aa6.32□□□□□ -1.4
USF1-210ENST00000531842 NBDYA0A0U1RRE5 68 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 FAM90A26D6RGX4 464 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 H3BMM0 161 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms