RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 H3BP45 60 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 I3L2K1 104 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 FABP1P07148 127 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 CMC4P56277 68 aaPredicted RBP9.01□□□□□ -0.97
USH1C-208ENST00000529563 ID3Q02535 119 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 OR4D5Q8NGN0 318 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 RNF183Q96D59 192 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 NARS2Q96I59 477 aaKnown RBP9.01□□□□□ -0.97
USH1C-208ENST00000529563 GINS3Q9BRX5 216 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 MED28Q9H204 178 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 MGAT4CQ9UBM8 478 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 HYDINQ4G0P3 5121 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 K7EMT4 169 aa9□□□□□ -0.97
USH1C-208ENST00000529563 PET100P0DJ07 73 aa9□□□□□ -0.97
USH1C-208ENST00000529563 CAV2P51636 162 aa9□□□□□ -0.97
USH1C-208ENST00000529563 RND2P52198 227 aa9□□□□□ -0.97
USH1C-208ENST00000529563 EWSR1Q01844 656 aaKnown RBP eCLIP9□□□□□ -0.97
USH1C-208ENST00000529563 ODF3L2Q3SX64 289 aa9□□□□□ -0.97
USH1C-208ENST00000529563 OR8G2PQ6IF36 304 aa9□□□□□ -0.97
USH1C-208ENST00000529563 APRG1Q8IVJ8 170 aa9□□□□□ -0.97
USH1C-208ENST00000529563 TMEM116Q8NCL8 245 aa9□□□□□ -0.97
USH1C-208ENST00000529563 PHLDA1Q8WV24 401 aaPredicted RBP9□□□□□ -0.97
USH1C-208ENST00000529563 SMIM8Q96KF7 97 aa9□□□□□ -0.97
USH1C-208ENST00000529563 CHRDL1Q9BU40 450 aa9□□□□□ -0.97
USH1C-208ENST00000529563 FBXL17Q9UF56 701 aa9□□□□□ -0.97
USH1C-208ENST00000529563 RCL1Q9Y2P8 373 aaKnown RBP9□□□□□ -0.97
USH1C-208ENST00000529563 IGHV3-49A0A0A0MS15 119 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 ZFP92A6NM28 416 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 C15orf62A8K5M9 175 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 CLN5O75503 358 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 SIX6O95475 246 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 MBPP02686 304 aaPredicted RBP8.99□□□□□ -0.97
USH1C-208ENST00000529563 GPX4P36969 197 aaPredicted RBP8.99□□□□□ -0.97
USH1C-208ENST00000529563 TAS2R30P59541 319 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 PAFAH1B2P68402 229 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 AKR1C1Q04828 323 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 BSXQ3C1V8 233 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 LRRC37A5PQ49AS3 106 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 OR10P1Q8NGE3 313 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 OR1S2Q8NGQ3 325 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 OR4X1Q8NH49 305 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 Q8WTZ3 238 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 RARRES2Q99969 163 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 RHPN1-AS1Q9BWJ2 59 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 CSTL1Q9H114 145 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 MAP6D1Q9H9H5 199 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 ALG5Q9Y673 324 aa8.99□□□□□ -0.97
USH1C-208ENST00000529563 PLECQ15149 4684 aaKnown RBP8.98□□□□□ -0.97
USH1C-208ENST00000529563 IGHV7-4-1A0A0J9YVY3 117 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 DNASE2O00115 360 aaPredicted RBP8.98□□□□□ -0.97
USH1C-208ENST00000529563 TSC22D2O75157 780 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 TMEM50AO95807 157 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 ATF4P18848 351 aaPredicted RBP8.98□□□□□ -0.97
USH1C-208ENST00000529563 OR10J1P30954 320 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 FCGR2BP31994 310 aaPredicted RBP8.98□□□□□ -0.97
USH1C-208ENST00000529563 RPL11P62913 178 aaKnown RBP8.98□□□□□ -0.97
USH1C-208ENST00000529563 ZNF600Q6ZNG1 722 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 STX12Q86Y82 276 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 GBGT1Q8N5D6 347 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 RPP25LQ8N5L8 163 aaKnown RBP8.98□□□□□ -0.97
USH1C-208ENST00000529563 NPIPB3Q92617 1050 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 RNF2Q99496 336 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 NMES1Q9C002 83 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 MFFQ9GZY8 342 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 SMPXQ9UHP9 88 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 PFDN2Q9UHV9 154 aa8.98□□□□□ -0.97
USH1C-208ENST00000529563 IGHV3OR16-13A0A075B7E8 117 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 TRAV14DV4A0A0A6YYC5 116 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 IGHV3-74A0A0B4J1X5 117 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 K7EPK0 472 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 CTSGP08311 255 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 METTL15P1P0C7V9 234 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 RAB32Q13637 225 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 MLANAQ16655 118 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 LILRB2Q8N423 598 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 C11orf45Q8TAV5 145 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 GATAD1Q8WUU5 269 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 FNDC4Q9H6D8 234 aaPredicted RBP8.97□□□□□ -0.97
USH1C-208ENST00000529563 TMEM231Q9H6L2 316 aa8.97□□□□□ -0.97
USH1C-208ENST00000529563 C7orf66A4D0T2 115 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 E5RGE8 158 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 CHEK1O14757 476 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 DEDDO75618 318 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 CA1P00915 261 aaPredicted RBP8.96□□□□□ -0.98
USH1C-208ENST00000529563 RD3LP0DJH9 198 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 S100A7P31151 101 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 ADMP35318 185 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 NUP62P37198 522 aaPredicted RBP8.96□□□□□ -0.98
USH1C-208ENST00000529563 NANOS2P60321 138 aaKnown RBP8.96□□□□□ -0.98
USH1C-208ENST00000529563 RRAS2P62070 204 aaPredicted RBP8.96□□□□□ -0.98
USH1C-208ENST00000529563 HBG1P69891 147 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 HBG2P69892 147 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 TIGITQ495A1 244 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 PVRIGQ6DKI7 326 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 PRSS54Q6PEW0 395 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 OR11H2Q8NH07 326 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 PPP1R14BQ96C90 147 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 SLC25A31Q9H0C2 315 aa8.96□□□□□ -0.98
USH1C-208ENST00000529563 PUS1Q9Y606 427 aaKnown RBP eCLIP8.96□□□□□ -0.98
USH1C-208ENST00000529563 A0A1W2PS18 150 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms