RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 FAM90A2PQ658T7 463 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 ZNF600Q6ZNG1 722 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 ACOT7LQ6ZUV0 252 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 OR52E5Q8NH55 327 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 GPR146Q96CH1 333 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 RNF183Q96D59 192 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 ZNF414Q96IQ9 312 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 RNF126Q9BV68 326 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 GSKIPQ9P0R6 139 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 UBQLN2Q9UHD9 624 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 PLECQ15149 4684 aaKnown RBP10.52□□□□□ -0.73
CAPN1-212ENST00000527887 TRAV2A0A0B4J234 112 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 E5RGE8 158 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 TMEM50AO95807 157 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 MBPP02686 304 aaPredicted RBP10.51□□□□□ -0.73
CAPN1-212ENST00000527887 NKX2-1P43699 371 aaPredicted RBP10.51□□□□□ -0.73
CAPN1-212ENST00000527887 NKX2-5P52952 324 aaPredicted RBP10.51□□□□□ -0.73
CAPN1-212ENST00000527887 RAB32Q13637 225 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 IZUMO4Q1ZYL8 232 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 LGALSLQ3ZCW2 172 aaPredicted RBP10.51□□□□□ -0.73
CAPN1-212ENST00000527887 TOMM20LQ6UXN7 152 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 TMEM217Q8N7C4 229 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 INO80EQ8NBZ0 244 aaPredicted RBP10.51□□□□□ -0.73
CAPN1-212ENST00000527887 RNASE11Q8TAA1 199 aaKnown RBP10.51□□□□□ -0.73
CAPN1-212ENST00000527887 MFFQ9GZY8 342 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 TMEM231Q9H6L2 316 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 VSIRQ9H7M9 311 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 MAP6D1Q9H9H5 199 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.51□□□□□ -0.73
CAPN1-212ENST00000527887 HSPB11Q9Y547 144 aa10.51□□□□□ -0.73
CAPN1-212ENST00000527887 FXYD6-FXYD2A0A087WZ82 144 aa10.5□□□□□ -0.73
CAPN1-212ENST00000527887 L7N2F9 121 aa10.5□□□□□ -0.73
CAPN1-212ENST00000527887 DFFBO76075 338 aa10.5□□□□□ -0.73
CAPN1-212ENST00000527887 RNASE2P10153 161 aaKnown RBP10.5□□□□□ -0.73
CAPN1-212ENST00000527887 PVALBP20472 110 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-212ENST00000527887 S100A11P31949 105 aa10.5□□□□□ -0.73
CAPN1-212ENST00000527887 NUP62P37198 522 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-212ENST00000527887 HOXA1P49639 335 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-212ENST00000527887 TAS2R30P59541 319 aa10.5□□□□□ -0.73
CAPN1-212ENST00000527887 SPCS3P61009 180 aa10.5□□□□□ -0.73
CAPN1-212ENST00000527887 KCNRGQ8N5I3 272 aa10.5□□□□□ -0.73
CAPN1-212ENST00000527887 AQP10Q96PS8 301 aa10.5□□□□□ -0.73
CAPN1-212ENST00000527887 RAB40CQ96S21 281 aa10.5□□□□□ -0.73
CAPN1-212ENST00000527887 TRAV30A0A087WSZ9 112 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 A0A1W2PS18 150 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 H0YIZ8 118 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 K7EPK0 472 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 CLN5O75503 358 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 MED6O75586 246 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 IGHV3-48P01763 117 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 HTR2BP41595 481 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 P2RY1P47900 373 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 DEFB135Q30KP9 77 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 BSXQ3C1V8 233 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 LRRC37A5PQ49AS3 106 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 SPINK9Q5DT21 86 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 TCF24Q7RTU0 167 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 OR4X1Q8NH49 305 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 GATAD1Q8WUU5 269 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 CSTL1Q9H114 145 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 MBD2Q9UBB5 411 aa10.49□□□□□ -0.73
CAPN1-212ENST00000527887 PUS1Q9Y606 427 aaKnown RBP eCLIP10.49□□□□□ -0.73
CAPN1-212ENST00000527887 A0A0G2JRQ6 117 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 A0A0J9YWU9 116 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 RPS10-NUDT3A0A1W2PQS6 291 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 NUPR2A6NF83 97 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 TAAR5O14804 337 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 ARPC5O15511 151 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 RPL35AP18077 110 aaKnown RBP10.48□□□□□ -0.73
CAPN1-212ENST00000527887 CXCL2P19875 107 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 NPPCP23582 126 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 Q6ZRM9 215 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 OR1S1Q8NH92 325 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 ZFAND3Q9H8U3 227 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 HSPB7Q9UBY9 170 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 CACNG5Q9UF02 275 aa10.48□□□□□ -0.73
CAPN1-212ENST00000527887 IGHV3-49A0A0A0MS15 119 aa10.47□□□□□ -0.73
CAPN1-212ENST00000527887 RNF222A6NCQ9 220 aa10.47□□□□□ -0.73
CAPN1-212ENST00000527887 DNASE2O00115 360 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-212ENST00000527887 OPRK1P41145 380 aa10.47□□□□□ -0.73
CAPN1-212ENST00000527887 TFPI2P48307 235 aa10.47□□□□□ -0.73
CAPN1-212ENST00000527887 S100A10P60903 97 aa10.47□□□□□ -0.73
CAPN1-212ENST00000527887 TMUB2Q71RG4 321 aa10.47□□□□□ -0.73
CAPN1-212ENST00000527887 APRG1Q8IVJ8 170 aa10.47□□□□□ -0.73
CAPN1-212ENST00000527887 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
CAPN1-212ENST00000527887 NARS2Q96I59 477 aaKnown RBP10.47□□□□□ -0.73
CAPN1-212ENST00000527887 CIB3Q96Q77 187 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-212ENST00000527887 C11orf1Q9H5F2 150 aa10.47□□□□□ -0.73
CAPN1-212ENST00000527887 OR5AC2Q9NZP5 309 aa10.47□□□□□ -0.73
CAPN1-212ENST00000527887 CXorf65A6NEN9 183 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 WRBO00258 174 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 RGS13O14921 159 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 SYNGR2O43760 224 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 CRYBB3P26998 211 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 OPCMLQ14982 345 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 C2orf83Q53S99 150 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 SLC51BQ86UW2 128 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 GBGT1Q8N5D6 347 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 ST8SIA2Q92186 375 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 SMIM8Q96KF7 97 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms