RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ZNF616Q08AN1 781 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 DEFB136Q30KP8 78 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 TEPPQ6URK8 271 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 OR11H1Q8NG94 326 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 RAX2Q96IS3 184 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 PRR25Q96S07 402 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 SMIM3Q9BZL3 60 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 UBE2L5PA0A1B0GUS4 154 aa13.18□□□□□ -0.3
CCS-204ENST00000526066 TAAR5O14804 337 aa13.18□□□□□ -0.3
CCS-204ENST00000526066 MPDU1O75352 247 aa13.18□□□□□ -0.3
CCS-204ENST00000526066 FABP1P07148 127 aa13.18□□□□□ -0.3
CCS-204ENST00000526066 EIF2B2P49770 351 aaKnown RBP13.18□□□□□ -0.3
CCS-204ENST00000526066 RELQ04864 619 aaPredicted RBP13.18□□□□□ -0.3
CCS-204ENST00000526066 DUX3Q96PT4 197 aa13.18□□□□□ -0.3
CCS-204ENST00000526066 ASCL2Q99929 193 aa13.18□□□□□ -0.3
CCS-204ENST00000526066 PARD6GQ9BYG4 376 aaPredicted RBP13.18□□□□□ -0.3
CCS-204ENST00000526066 WFDC1Q9HC57 220 aa13.18□□□□□ -0.3
CCS-204ENST00000526066 DNAH9Q9NYC9 4486 aa13.17□□□□□ -0.3
CCS-204ENST00000526066 SEC14L6B5MCN3 397 aa13.17□□□□□ -0.3
CCS-204ENST00000526066 IFNA5P01569 189 aa13.17□□□□□ -0.3
CCS-204ENST00000526066 RAB31Q13636 194 aa13.17□□□□□ -0.3
CCS-204ENST00000526066 ZNF266Q14584 549 aa13.17□□□□□ -0.3
CCS-204ENST00000526066 RPEL1Q2QD12 228 aa13.17□□□□□ -0.3
CCS-204ENST00000526066 TIGITQ495A1 244 aa13.17□□□□□ -0.3
CCS-204ENST00000526066 BTNL8Q6UX41 500 aa13.17□□□□□ -0.3
CCS-204ENST00000526066 ZNF600Q6ZNG1 722 aa13.17□□□□□ -0.3
CCS-204ENST00000526066 GPHB5Q86YW7 130 aa13.17□□□□□ -0.3
CCS-204ENST00000526066 NDUFA4O00483 81 aa13.16□□□□□ -0.3
CCS-204ENST00000526066 OR2C1O95371 312 aa13.16□□□□□ -0.3
CCS-204ENST00000526066 TOMM40O96008 361 aa13.16□□□□□ -0.3
CCS-204ENST00000526066 SELENOTP62341 195 aa13.16□□□□□ -0.3
CCS-204ENST00000526066 LGALSLQ3ZCW2 172 aaPredicted RBP13.16□□□□□ -0.3
CCS-204ENST00000526066 MUC7Q8TAX7 377 aa13.16□□□□□ -0.3
CCS-204ENST00000526066 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
CCS-204ENST00000526066 ARPC5LQ9BPX5 153 aa13.16□□□□□ -0.3
CCS-204ENST00000526066 WDR61Q9GZS3 305 aaKnown RBP13.16□□□□□ -0.3
CCS-204ENST00000526066 STAB2Q8WWQ8 2551 aa13.16□□□□□ -0.3
CCS-204ENST00000526066 AGPAT2O15120 278 aa13.15□□□□□ -0.3
CCS-204ENST00000526066 CFDP00746 253 aaPredicted RBP13.15□□□□□ -0.3
CCS-204ENST00000526066 RD3LP0DJH9 198 aa13.15□□□□□ -0.3
CCS-204ENST00000526066 FGF7P21781 194 aa13.15□□□□□ -0.3
CCS-204ENST00000526066 ZNF90Q03938 601 aa13.15□□□□□ -0.3
CCS-204ENST00000526066 FAM106AQ4KMX7 169 aa13.15□□□□□ -0.3
CCS-204ENST00000526066 CYP2G1PQ6ZSU1 146 aa13.15□□□□□ -0.3
CCS-204ENST00000526066 C9orf62Q8N4C0 152 aa13.15□□□□□ -0.3
CCS-204ENST00000526066 SCGB1C1Q8TD33 95 aa13.15□□□□□ -0.3
CCS-204ENST00000526066 Q8WTZ3 238 aa13.15□□□□□ -0.3
CCS-204ENST00000526066 MGST2Q99735 147 aa13.15□□□□□ -0.3
CCS-204ENST00000526066 ZNF256Q9Y2P7 627 aaPredicted RBP13.15□□□□□ -0.3
CCS-204ENST00000526066 BORCS7-ASMTA0A0B4J1R7 106 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 LGALS9O00182 355 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 BCL2L11O43521 198 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 PSG1P11464 419 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 CAMLGP49069 296 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 KLF5Q13887 457 aaPredicted RBP13.14□□□□□ -0.31
CCS-204ENST00000526066 TMUB2Q71RG4 321 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 PPP1R14BQ96C90 147 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 GGTLC1Q9BX51 225 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 ARL6Q9H0F7 186 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 SLC45A2Q9UMX9 530 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 SMAD5-AS1Q9Y6J3 95 aa13.14□□□□□ -0.31
CCS-204ENST00000526066 KANTRA0A1W2PQU2 76 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 JTBO76095 146 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 SLURP1P55000 103 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 OPCMLQ14982 345 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 CASC10Q5T4H9 136 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 LAMTOR1Q6IAA8 161 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 TOMM20LQ6UXN7 152 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 OR51G1Q8NGK1 321 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 TMEM190Q8WZ59 177 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 NPCDR1Q9BY65 106 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 CYTL1Q9NRR1 136 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 KCNIP2Q9NS61 270 aa13.13□□□□□ -0.31
CCS-204ENST00000526066 PUS1Q9Y606 427 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCS-204ENST00000526066 IGHV3-35A0A0C4DH35 117 aa13.12□□□□□ -0.31
CCS-204ENST00000526066 C4BPBP20851 252 aa13.12□□□□□ -0.31
CCS-204ENST00000526066 RPL29P47914 159 aaKnown RBP13.12□□□□□ -0.31
CCS-204ENST00000526066 RPL7L1Q6DKI1 246 aaKnown RBP13.12□□□□□ -0.31
CCS-204ENST00000526066 BPIFCQ8NFQ6 507 aa13.12□□□□□ -0.31
CCS-204ENST00000526066 ZFAND3Q9H8U3 227 aa13.12□□□□□ -0.31
CCS-204ENST00000526066 A8MWP6 167 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 C17orf112F2Z3M2 114 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 INSL3P51460 131 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 ELLP55199 621 aaPredicted RBP13.11□□□□□ -0.31
CCS-204ENST00000526066 SYNJ2BPP57105 145 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 PLP1P60201 277 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 PRR20EP86478 221 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 PRR20CP86479 221 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 PRR20DP86480 221 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 PRR20BP86481 221 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 PRR20AP86496 221 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 UNQ9165/PRO28630Q6UXU0 137 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 TMEM182Q6ZP80 229 aaPredicted RBP13.11□□□□□ -0.31
CCS-204ENST00000526066 ZNF709Q8N972 641 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 DLX4Q92988 240 aaPredicted RBP13.11□□□□□ -0.31
CCS-204ENST00000526066 RCHY1Q96PM5 261 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 ARV1Q9H2C2 271 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 TIMM9Q9Y5J7 89 aa13.11□□□□□ -0.31
CCS-204ENST00000526066 BOLA2-SMG1P6H3BVE0 249 aa13.1□□□□□ -0.31
CCS-204ENST00000526066 K7EMT4 169 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms