RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 BAK1Q16611 211 aa9.02□□□□□ -0.97
VEGFA-223ENST00000523125 TMEM217Q8N7C4 229 aa9.02□□□□□ -0.97
VEGFA-223ENST00000523125 OR51G1Q8NGK1 321 aa9.02□□□□□ -0.97
VEGFA-223ENST00000523125 LINC00476Q8WZB0 136 aa9.02□□□□□ -0.97
VEGFA-223ENST00000523125 C11orf68Q9H3H3 251 aaKnown RBP9.02□□□□□ -0.97
VEGFA-223ENST00000523125 IGKV1OR2-108A0A075B7D4 117 aa9.01□□□□□ -0.97
VEGFA-223ENST00000523125 FAM90A26D6RGX4 464 aa9.01□□□□□ -0.97
VEGFA-223ENST00000523125 IAPPP10997 89 aa9.01□□□□□ -0.97
VEGFA-223ENST00000523125 EIF2B2P49770 351 aaKnown RBP9.01□□□□□ -0.97
VEGFA-223ENST00000523125 AP2S1P53680 142 aaPredicted RBP9.01□□□□□ -0.97
VEGFA-223ENST00000523125 SPANXN2Q5MJ10 180 aa9.01□□□□□ -0.97
VEGFA-223ENST00000523125 CENPSQ8N2Z9 138 aa9.01□□□□□ -0.97
VEGFA-223ENST00000523125 RNF125Q96EQ8 232 aa9.01□□□□□ -0.97
VEGFA-223ENST00000523125 RAB40CQ96S21 281 aa9.01□□□□□ -0.97
VEGFA-223ENST00000523125 SDHCQ99643 169 aaPredicted RBP9.01□□□□□ -0.97
VEGFA-223ENST00000523125 TMED3Q9Y3Q3 217 aa9.01□□□□□ -0.97
VEGFA-223ENST00000523125 ZFP92A6NM28 416 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 PRSS46E5RG02 174 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 DEFB4AO15263 64 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 HOXB5P09067 269 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 C4BPBP20851 252 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 PSMG4Q5JS54 123 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 ACTL10Q5JWF8 245 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 SIGLEC15Q6ZMC9 328 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 Q8NAQ8 132 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 CSNK1G2-AS1Q8NCQ2 148 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 PHLDA1Q8WV24 401 aaPredicted RBP9□□□□□ -0.97
VEGFA-223ENST00000523125 MAGT1Q9H0U3 335 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 NRN1Q9NPD7 142 aa9□□□□□ -0.97
VEGFA-223ENST00000523125 C9orf170A2RU37 121 aa8.99□□□□□ -0.97
VEGFA-223ENST00000523125 SYNGR2O43760 224 aa8.99□□□□□ -0.97
VEGFA-223ENST00000523125 SPP1P10451 314 aa8.99□□□□□ -0.97
VEGFA-223ENST00000523125 NANOS2P60321 138 aaKnown RBP8.99□□□□□ -0.97
VEGFA-223ENST00000523125 UBE2MP61081 183 aaKnown RBP8.99□□□□□ -0.97
VEGFA-223ENST00000523125 GGNBP1Q5YKI7 109 aa8.99□□□□□ -0.97
VEGFA-223ENST00000523125 OR8G2PQ6IF36 304 aa8.99□□□□□ -0.97
VEGFA-223ENST00000523125 MORN3Q6PF18 240 aaPredicted RBP8.99□□□□□ -0.97
VEGFA-223ENST00000523125 THAP8Q8NA92 274 aa8.99□□□□□ -0.97
VEGFA-223ENST00000523125 SLC35E1Q96K37 410 aa8.99□□□□□ -0.97
VEGFA-223ENST00000523125 PBDC1Q9BVG4 233 aa8.99□□□□□ -0.97
VEGFA-223ENST00000523125 SEPSECSQ9HD40 501 aaKnown RBP8.99□□□□□ -0.97
VEGFA-223ENST00000523125 FLVCR2Q9UPI3 526 aa8.99□□□□□ -0.97
VEGFA-223ENST00000523125 ZNF705EA8MWA4 302 aaPredicted RBP8.98□□□□□ -0.97
VEGFA-223ENST00000523125 WRBO00258 174 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 MED6O75586 246 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 ADAP1O75689 374 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 NDUFB6O95139 128 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 RBMY1A1P0DJD3 496 aaKnown RBP8.98□□□□□ -0.97
VEGFA-223ENST00000523125 RBMY1CP0DJD4 496 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 BTCP35070 178 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 RAB11AP62491 216 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 RBMY1FQ15415 496 aaKnown RBP8.98□□□□□ -0.97
VEGFA-223ENST00000523125 TMEM41BQ5BJD5 291 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 C11orf45Q8TAV5 145 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 TRGV9Q99603 122 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 WDR12Q9GZL7 423 aaKnown RBP8.98□□□□□ -0.97
VEGFA-223ENST00000523125 KLK5Q9Y337 293 aaPredicted RBP8.98□□□□□ -0.97
VEGFA-223ENST00000523125 X6R8D5 127 aa8.98□□□□□ -0.97
VEGFA-223ENST00000523125 KMT2AQ03164 3969 aa8.97□□□□□ -0.97
VEGFA-223ENST00000523125 NAP1L6A6NFF2 107 aa8.97□□□□□ -0.97
VEGFA-223ENST00000523125 SNRPGP15A8MWD9 76 aa8.97□□□□□ -0.97
VEGFA-223ENST00000523125 H3BMM0 161 aa8.97□□□□□ -0.97
VEGFA-223ENST00000523125 LY6G6CO95867 125 aa8.97□□□□□ -0.97
VEGFA-223ENST00000523125 SNRPD3P62318 126 aaKnown RBP8.97□□□□□ -0.97
VEGFA-223ENST00000523125 ID3Q02535 119 aa8.97□□□□□ -0.97
VEGFA-223ENST00000523125 OR2F1Q13607 317 aa8.97□□□□□ -0.97
VEGFA-223ENST00000523125 CIB3Q96Q77 187 aaPredicted RBP8.97□□□□□ -0.97
VEGFA-223ENST00000523125 CLEC5AQ9NY25 188 aa8.97□□□□□ -0.97
VEGFA-223ENST00000523125 IGHV4-28A0A0C4DH34 117 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 LINC00854A0A1B0GVQ3 168 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 SOCS3O14543 225 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 FABP1P07148 127 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 NUP62P37198 522 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-223ENST00000523125 DEFB1P60022 68 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 LYZP61626 148 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 SPANXN5Q5MJ07 72 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 C1orf194Q5T5A4 169 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 GDF5OSQ5U4N7 250 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 TRIQKQ629K1 86 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 GSG1LQ6UXU4 331 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 TMEM182Q6ZP80 229 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-223ENST00000523125 MFFQ9GZY8 342 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 FBXL17Q9UF56 701 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 PAIP2BQ9ULR5 123 aaKnown RBP8.96□□□□□ -0.98
VEGFA-223ENST00000523125 BIRC6Q9NR09 4857 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 FRAS1Q86XX4 4008 aa8.96□□□□□ -0.98
VEGFA-223ENST00000523125 VPS13DQ5THJ4 4388 aa8.95□□□□□ -0.98
VEGFA-223ENST00000523125 ELOA3CA0A087WX78 387 aaPredicted RBP8.95□□□□□ -0.98
VEGFA-223ENST00000523125 H3BP45 60 aa8.95□□□□□ -0.98
VEGFA-223ENST00000523125 OR4E1P0C645 316 aa8.95□□□□□ -0.98
VEGFA-223ENST00000523125 IL7P13232 177 aa8.95□□□□□ -0.98
VEGFA-223ENST00000523125 HLA-DRB4P13762 266 aa8.95□□□□□ -0.98
VEGFA-223ENST00000523125 MIFP14174 115 aa8.95□□□□□ -0.98
VEGFA-223ENST00000523125 ANXA7P20073 488 aaKnown RBP8.95□□□□□ -0.98
VEGFA-223ENST00000523125 NKX2-1P43699 371 aaPredicted RBP8.95□□□□□ -0.98
VEGFA-223ENST00000523125 INPP1P49441 399 aa8.95□□□□□ -0.98
VEGFA-223ENST00000523125 POLR2GP62487 172 aaKnown RBP eCLIP8.95□□□□□ -0.98
VEGFA-223ENST00000523125 RPP30P78346 268 aaKnown RBP8.95□□□□□ -0.98
VEGFA-223ENST00000523125 C17orf77Q96MU5 243 aa8.95□□□□□ -0.98
VEGFA-223ENST00000523125 HRH4Q9H3N8 390 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms