RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PRR20EP86478 221 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 PRR20CP86479 221 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 PRR20DP86480 221 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 PRR20BP86481 221 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 PRR20AP86496 221 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 HIST3H2BBQ8N257 126 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 NBEAQ8NFP9 2946 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 AMY1AP04745 511 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 MAS1LP35410 378 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 CLEC2AQ6UVW9 174 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 HSPB9Q9BQS6 159 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 Q9H3A6 140 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 IGKV1OR2-108A0A075B7D4 117 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 CD99P14209 185 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 SRIP30626 198 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 FAM71F2Q6NXP2 309 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 DMRTC2Q8IXT2 367 aaPredicted RBP8.17□□□□□ -1.1
MCF2-209ENST00000520602 PGLYRP4Q96LB8 373 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 F11RQ9Y624 299 aaKnown RBP8.17□□□□□ -1.1
MCF2-209ENST00000520602 A0A087X0M5 115 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 A0A1B0GX30 115 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 LINC00587B1AMM8 73 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 UQCRFS1P47985 274 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 HIST1H2BLQ99880 126 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 C21orf62Q9NYP8 219 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 JKAMPQ9P055 326 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 FBXL7Q9UJT9 491 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 TANC2Q9HCD6 1990 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 IGHV3-66A0A0C4DH42 116 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 OR2T8A6NH00 312 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 A8MWL6 223 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 FNDC10F2Z333 226 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 ADMP35318 185 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 C5orf17Q8NAS9 161 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 NOL4LQ96MY1 436 aaPredicted RBP8.16□□□□□ -1.1
MCF2-209ENST00000520602 NDFIP1Q9BT67 221 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 BPESC1Q9GZL8 116 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 RNF24Q9Y225 148 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 SH2D7A6NKC9 451 aaPredicted RBP8.16□□□□□ -1.1
MCF2-209ENST00000520602 GGTLC3B5MD39 225 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 ISLRO14498 428 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 CX3CL1P78423 397 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 PYY3Q5JQD4 70 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 GBGT1Q8N5D6 347 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 VN1R17PQ8TDU5 208 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 EPDR1Q9UM22 224 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 DOPEY2Q9Y3R5 2298 aa8.16□□□□□ -1.1
MCF2-209ENST00000520602 A0A1B0GWJ7 208 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 CGB1A6NKQ9 187 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 IGHV2-5P01817 119 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 RAB4AP20338 218 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 EXOC3-AS1Q8N2X6 119 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 BEND2Q8NDZ0 799 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 HIF1ANQ9NWT6 349 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 LINC00527Q9UJ94 153 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 AKAP13Q12802 2813 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 ZNF207O43670 478 aaKnown RBP8.15□□□□□ -1.1
MCF2-209ENST00000520602 IGHV2-70P01814 119 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 PRTN3P24158 256 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 GPR183P32249 361 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 ZNF600Q6ZNG1 722 aa8.15□□□□□ -1.1
MCF2-209ENST00000520602 A1L4Q6 167 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 GGCTO75223 188 aaKnown RBP8.15□□□□□ -1.11
MCF2-209ENST00000520602 GOSR1O95249 250 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 CLEC3BP05452 202 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 PDLIM4P50479 330 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 EFNA4P52798 201 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 TAS2R60P59551 318 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 FOXL1Q12952 345 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 C5orf64Q2M2E5 130 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 MORN5Q5VZ52 161 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 TBX15Q96SF7 602 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 CCL19Q99731 98 aa8.15□□□□□ -1.11
MCF2-209ENST00000520602 TRAV8-1A0A0A6YYK1 113 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 A0A1B0GUS0 222 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 J3KRW8 73 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 MT-ND6P03923 174 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 COX19Q49B96 90 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 C8orf46Q8TAG6 207 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 RNF125Q96EQ8 232 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 ZFYVE26Q68DK2 2539 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 LOC400499M0QZD8 3231 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 MYO18BQ8IUG5 2567 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 HLA-DQA1P01909 254 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 FOXA3P55318 350 aaPredicted RBP8.14□□□□□ -1.11
MCF2-209ENST00000520602 TMEM256Q8N2U0 113 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 GPR82Q96P67 336 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 TXN2Q99757 166 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 VAMP8Q9BV40 100 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 PAM16Q9Y3D7 125 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 TRAV30A0A087WSZ9 112 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 IGLC7A0M8Q6 106 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 AMBPP02760 352 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 TCF24Q7RTU0 167 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 TMEM219Q86XT9 240 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 FAM168AQ92567 244 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 TRGV9Q99603 122 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 ASCL2Q99929 193 aa8.14□□□□□ -1.11
MCF2-209ENST00000520602 MRPL36Q9P0J6 103 aaKnown RBP8.14□□□□□ -1.11
MCF2-209ENST00000520602 TRBV20OR9-2A0A075B6H5 130 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms