RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 MFAP4P55083 255 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 NUTF2P61970 127 aaKnown RBP8.23□□□□□ -1.09
RNF4-216ENST00000511859 IZUMO4Q1ZYL8 232 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 C4orf46Q504U0 113 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 TMEM128Q5BJH2 165 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 SPATA12Q7Z6I5 190 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 LHFPL5Q8TAF8 219 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 GLYATL2Q8WU03 294 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 LSM10Q969L4 123 aaKnown RBP8.23□□□□□ -1.09
RNF4-216ENST00000511859 TMEM222Q9H0R3 208 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 TMEM231Q9H6L2 316 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 RABAC1Q9UI14 185 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 KCNIP3Q9Y2W7 256 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 FLG2Q5D862 2391 aaPredicted RBP8.23□□□□□ -1.09
RNF4-216ENST00000511859 MARCH11A6NNE9 402 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 OR4E1P0C645 316 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 UCP1P25874 307 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 UBE2MP61081 183 aaKnown RBP8.22□□□□□ -1.09
RNF4-216ENST00000511859 RNASE11Q8TAA1 199 aaKnown RBP8.22□□□□□ -1.09
RNF4-216ENST00000511859 NEU1Q99519 415 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 SEC22CQ9BRL7 303 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 PLEKHA2Q9HB19 425 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 NDUFA4L2Q9NRX3 87 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 NSG2Q9Y328 171 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 TMED3Q9Y3Q3 217 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 NBDYA0A0U1RRE5 68 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 TEX48A0A1B0GUV7 120 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 A0A1W2PS18 150 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 C9orf170A2RU37 121 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 SMIM9A6NGZ8 99 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 KNCNA6PVL3 124 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 K7EQG2 157 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 SFT2D2O95562 160 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 IGKV1-5P01602 117 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 APOHP02749 345 aaPredicted RBP8.22□□□□□ -1.09
RNF4-216ENST00000511859 AKR1C2P52895 323 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 ERVK-16P61578 105 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 DHODHQ02127 395 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 ACTL10Q5JWF8 245 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 TMEM268Q5VZI3 342 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 TOMM20LQ6UXN7 152 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 SELENOHQ8IZQ5 122 aaKnown RBP8.22□□□□□ -1.09
RNF4-216ENST00000511859 OR1P1Q8NH06 330 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 SEC22AQ96IW7 307 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 TMEM140Q9NV12 185 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 COMMD9Q9P000 198 aa8.22□□□□□ -1.09
RNF4-216ENST00000511859 A0A0G2JRQ6 117 aa8.21□□□□□ -1.1
RNF4-216ENST00000511859 INMT-MINDY4F8WBC2 141 aa8.21□□□□□ -1.1
RNF4-216ENST00000511859 ANXA3P12429 323 aa8.21□□□□□ -1.1
RNF4-216ENST00000511859 DHRS2Q13268 280 aa8.21□□□□□ -1.1
RNF4-216ENST00000511859 OXA1LQ15070 435 aa8.21□□□□□ -1.1
RNF4-216ENST00000511859 H2BFWTQ7Z2G1 175 aa8.21□□□□□ -1.1
RNF4-216ENST00000511859 LYZL2Q7Z4W2 148 aa8.21□□□□□ -1.1
RNF4-216ENST00000511859 SLC35G3Q8N808 338 aa8.21□□□□□ -1.1
RNF4-216ENST00000511859 RBPMSQ93062 196 aaKnown RBP8.21□□□□□ -1.1
RNF4-216ENST00000511859 TMEM56Q96MV1 263 aa8.21□□□□□ -1.1
RNF4-216ENST00000511859 NIPSNAP3BQ9BS92 247 aa8.21□□□□□ -1.1
RNF4-216ENST00000511859 I3L2K1 104 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 GNG7O60262 68 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 B3GALNT1O75752 331 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 CDS2O95674 445 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 PTTG1O95997 202 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 HOXB5P09067 269 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 ZNF688P0C7X2 276 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 RGS21Q2M5E4 152 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 CADM3Q8N126 398 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 LGI3Q8N145 548 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 C15orf53Q8NAA6 179 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 STXBP6Q8NFX7 210 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 RRNAD1Q96FB5 475 aaKnown RBP8.2□□□□□ -1.1
RNF4-216ENST00000511859 RAB40CQ96S21 281 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 ATG101Q9BSB4 218 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 HINT2Q9BX68 163 aa8.2□□□□□ -1.1
RNF4-216ENST00000511859 FAM212BQ9NTI7 297 aaPredicted RBP8.2□□□□□ -1.1
RNF4-216ENST00000511859 FAT1Q14517 4588 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 IGHV3-66A0A0C4DH42 116 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 DBX1A6NMT0 343 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 ADAP1O75689 374 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 NXPH3O95157 252 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 NPPCP23582 126 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 EMP1P54849 157 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 ZNF705AQ6ZN79 300 aaPredicted RBP8.19□□□□□ -1.1
RNF4-216ENST00000511859 DCANP1Q8TF63 244 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 MARVELD1Q9BSK0 173 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 FKBP11Q9NYL4 201 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 XCL2Q9UBD3 114 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 DKK2Q9UBU2 259 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 TMEM56-RWDD3S4R434 201 aa8.19□□□□□ -1.1
RNF4-216ENST00000511859 CCSO14618 274 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 SNAPC5O75971 98 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 ATG12O94817 140 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 NPBWR1P48145 328 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 SPINK9Q5DT21 86 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 TMEM88Q6PEY1 159 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 ZNF600Q6ZNG1 722 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 OR4A16Q8NH70 328 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 ZNRF2Q8NHG8 242 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 ZNF431Q8TF32 576 aaPredicted RBP8.18□□□□□ -1.1
RNF4-216ENST00000511859 GPR146Q96CH1 333 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 MISP3Q96FF7 219 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms