RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 MRGPRFQ96AM1 343 aa6.7□□□□□ -1.34
NEDD9-211ENST00000508546 NEU1Q99519 415 aa6.7□□□□□ -1.34
NEDD9-211ENST00000508546 PUS1Q9Y606 427 aaKnown RBP eCLIP6.7□□□□□ -1.34
NEDD9-211ENST00000508546 SRRM2Q9UQ35 2752 aaKnown RBP6.69□□□□□ -1.34
NEDD9-211ENST00000508546 FAT1Q14517 4588 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 DBX1A6NMT0 343 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 BOLA2-SMG1P6H3BVE0 249 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 SSNA1O43805 119 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 CCNKO75909 580 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 IGHV3-48P01763 117 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 IL5P05113 134 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 SPART-AS1P0CW21 52 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 NPPCP23582 126 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 CRYBB3P26998 211 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 G6PCP35575 357 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 LPAR6P43657 344 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 NPBWR1P48145 328 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 FAM3BP58499 235 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-211ENST00000508546 TNP2Q05952 138 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 C4orf46Q504U0 113 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 LHFPL1Q86WI0 220 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 OR6F1Q8NGZ6 308 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 MARCH1Q8TCQ1 289 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 SCGB3A2Q96PL1 93 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 SEC22CQ9BRL7 303 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 ZNF2Q9BSG1 426 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-211ENST00000508546 MED28Q9H204 178 aa6.69□□□□□ -1.34
NEDD9-211ENST00000508546 A0A1B0GU03 582 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 TMEM189A5PLL7 270 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 SNRPGP15A8MWD9 76 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 PGLYRP1O75594 196 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-211ENST00000508546 TMEM50AO95807 157 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 OR4E1P0C645 316 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 INAFM2P0DMQ5 153 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 P2RY1P47900 373 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 HERV-K104P61576 105 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 NUTF2P61970 127 aaKnown RBP6.68□□□□□ -1.34
NEDD9-211ENST00000508546 PRCDQ00LT1 54 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 CD300CQ08708 224 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 SURF2Q15527 256 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-211ENST00000508546 ZNF705AQ6ZN79 300 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-211ENST00000508546 PINX1Q96BK5 328 aaKnown RBP6.68□□□□□ -1.34
NEDD9-211ENST00000508546 MOB3AQ96BX8 217 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 C18orf15Q96N68 181 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 METTL26Q96S19 204 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 RAB40CQ96S21 281 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 FXYD6Q9H0Q3 95 aa6.68□□□□□ -1.34
NEDD9-211ENST00000508546 TEX48A0A1B0GUV7 120 aa6.67□□□□□ -1.34
NEDD9-211ENST00000508546 SMIM9A6NGZ8 99 aa6.67□□□□□ -1.34
NEDD9-211ENST00000508546 ZNF705FA8MVS1 300 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-211ENST00000508546 ZNF705DP0CH99 300 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-211ENST00000508546 ZNF705BP0CI00 300 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-211ENST00000508546 PGAM2P15259 253 aa6.67□□□□□ -1.34
NEDD9-211ENST00000508546 UBE2MP61081 183 aaKnown RBP6.67□□□□□ -1.34
NEDD9-211ENST00000508546 ERHP84090 104 aaKnown RBP6.67□□□□□ -1.34
NEDD9-211ENST00000508546 DHRS2Q13268 280 aa6.67□□□□□ -1.34
NEDD9-211ENST00000508546 FCN2Q15485 313 aa6.67□□□□□ -1.34
NEDD9-211ENST00000508546 DHRS11Q6UWP2 260 aa6.67□□□□□ -1.34
NEDD9-211ENST00000508546 OR11H7Q8NGC8 314 aa6.67□□□□□ -1.34
NEDD9-211ENST00000508546 ZNF431Q8TF32 576 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-211ENST00000508546 ST6GAL2Q96JF0 529 aa6.67□□□□□ -1.34
NEDD9-211ENST00000508546 SEPSECSQ9HD40 501 aaKnown RBP6.67□□□□□ -1.34
NEDD9-211ENST00000508546 FAM212BQ9NTI7 297 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-211ENST00000508546 XCL2Q9UBD3 114 aa6.67□□□□□ -1.34
NEDD9-211ENST00000508546 C14orf166Q9Y224 244 aaKnown RBP6.67□□□□□ -1.34
NEDD9-211ENST00000508546 HELTA6NFD8 242 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 H3BMM0 161 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 SULT1A3P0DMM9 295 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 SULT1A4P0DMN0 295 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 ANXA3P12429 323 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 AKR1C4P17516 323 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 PI3P19957 117 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 VAMP1P23763 118 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 EIF2B2P49770 351 aaKnown RBP6.66□□□□□ -1.34
NEDD9-211ENST00000508546 HSPE1P61604 102 aaKnown RBP6.66□□□□□ -1.34
NEDD9-211ENST00000508546 PPP1R1AQ13522 171 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 TMEM128Q5BJH2 165 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 PSMG4Q5JS54 123 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 CMTM1Q8IZ96 169 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 OR4A16Q8NH70 328 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 ZFAND1Q8TCF1 268 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 NARS2Q96I59 477 aaKnown RBP6.66□□□□□ -1.34
NEDD9-211ENST00000508546 SEC22AQ96IW7 307 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 NIPSNAP3BQ9BS92 247 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 MGAT4CQ9UBM8 478 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 DKK2Q9UBU2 259 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 GPR132Q9UNW8 380 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 U3KQE9 123 aa6.66□□□□□ -1.34
NEDD9-211ENST00000508546 EPM2AB3EWF7 344 aa6.65□□□□□ -1.34
NEDD9-211ENST00000508546 INS-IGF2F8WCM5 200 aa6.65□□□□□ -1.34
NEDD9-211ENST00000508546 CORTO00230 105 aa6.65□□□□□ -1.34
NEDD9-211ENST00000508546 GPR31O00270 319 aa6.65□□□□□ -1.34
NEDD9-211ENST00000508546 AP2S1P53680 142 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-211ENST00000508546 ZFP69Q49AA0 526 aa6.65□□□□□ -1.34
NEDD9-211ENST00000508546 H2BFWTQ7Z2G1 175 aa6.65□□□□□ -1.34
NEDD9-211ENST00000508546 TCTE3Q8IZS6 198 aa6.65□□□□□ -1.34
NEDD9-211ENST00000508546 C6orf223Q8N319 242 aa6.65□□□□□ -1.34
NEDD9-211ENST00000508546 C12orf45Q8N5I9 185 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-211ENST00000508546 TMEM230Q96A57 120 aa6.65□□□□□ -1.34
NEDD9-211ENST00000508546 RTBDNQ9BSG5 229 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms