RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SLC38A11Q08AI6 406 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 BEAN1Q3B7T3 259 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 IL34Q6ZMJ4 242 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 ACOT7LQ6ZUV0 252 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 LILRB2Q8N423 598 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 STPG3Q8N7X2 389 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 INO80EQ8NBZ0 244 aaPredicted RBP6.44□□□□□ -1.38
PDGFC-205ENST00000506880 DYNLRB2Q8TF09 96 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 PFDN5Q99471 154 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 RNF2Q99496 336 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 CHRDL1Q9BU40 450 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 ZFAND3Q9H8U3 227 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 CLEC5AQ9NY25 188 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 SMPXQ9UHP9 88 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 PUS1Q9Y606 427 aaKnown RBP eCLIP6.44□□□□□ -1.38
PDGFC-205ENST00000506880 U3KQE9 123 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 IGHV7-4-1A0A0J9YVY3 117 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 ZNF320A2RRD8 509 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 HMSDA8MTL9 139 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 A8MZ25 164 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 PPP5D1E7EU14 171 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 C17orf112F2Z3M2 114 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 HNRNPCP07910 306 aaKnown RBP eCLIP6.43□□□□□ -1.38
PDGFC-205ENST00000506880 RPL29P47914 159 aaKnown RBP6.43□□□□□ -1.38
PDGFC-205ENST00000506880 ZNF345Q14585 488 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 FCN2Q15485 313 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 DEFB114Q30KQ6 69 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 TOMM20LQ6UXN7 152 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 Q6ZNX1 250 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 Q6ZRG5 221 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 OR11H7Q8NGC8 314 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 OR1L4Q8NGR5 311 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 RNF125Q96EQ8 232 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 ACY3Q96HD9 319 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 NEURL2Q9BR09 285 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 RNF126Q9BV68 326 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 RABAC1Q9UI14 185 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 PAIP2BQ9ULR5 123 aaKnown RBP6.43□□□□□ -1.38
PDGFC-205ENST00000506880 WDR83OSQ9Y284 106 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 ZNF256Q9Y2P7 627 aaPredicted RBP6.43□□□□□ -1.38
PDGFC-205ENST00000506880 HSPB11Q9Y547 144 aa6.43□□□□□ -1.38
PDGFC-205ENST00000506880 IGKV1D-37A0A075B6S9 117 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 OR4C46A6NHA9 309 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 H3BP45 60 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 YIF1AO95070 293 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 NXPH3O95157 252 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 IFNA5P01569 189 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 PSG1P11464 419 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 IGLL1P15814 213 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 CXCL3P19876 107 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 RPL12P30050 165 aaKnown RBP6.42□□□□□ -1.38
PDGFC-205ENST00000506880 EIF5AP63241 154 aaKnown RBP6.42□□□□□ -1.38
PDGFC-205ENST00000506880 EWSR1Q01844 656 aaKnown RBP eCLIP6.42□□□□□ -1.38
PDGFC-205ENST00000506880 OR2F1Q13607 317 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 C19orf35Q6ZS72 473 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 CYP2G1PQ6ZSU1 146 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 GTSCR1Q86UQ5 136 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 TCTE3Q8IZS6 198 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 ZNF709Q8N972 641 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 OR2T35Q8NGX2 323 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 GATAD1Q8WUU5 269 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 ATP5SQ99766 215 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 MBD2Q9UBB5 411 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 TIMM9Q9Y5J7 89 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 CMYA5Q8N3K9 4069 aa6.42□□□□□ -1.38
PDGFC-205ENST00000506880 CHEK1O14757 476 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 SIX6O95475 246 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 IL4P05112 153 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 CXCL2P19875 107 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 C4BPBP20851 252 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 SERF2P84101 59 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 UNQ9165/PRO28630Q6UXU0 137 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 RBPMS2Q6ZRY4 209 aaKnown RBP6.41□□□□□ -1.38
PDGFC-205ENST00000506880 STXBP6Q8NFX7 210 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 OR5C1Q8NGR4 320 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 DUX3Q96PT4 197 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 RHPN1-AS1Q9BWJ2 59 aa6.41□□□□□ -1.38
PDGFC-205ENST00000506880 IGKV1OR2-108A0A075B7D4 117 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 BORCS7-ASMTA0A0B4J1R7 106 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 A0A0D9SG52 128 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 IGSF23A1L1A6 192 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 FAM24AA6NFZ4 105 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 H0YIZ8 118 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 AGPAT2O15120 278 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 BUB3O43684 328 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 HYPMO75409 117 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 JTBO76095 146 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 CST7O76096 145 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 IGHV3-23P01764 117 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 MBP02144 154 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 RPL7P18124 248 aaKnown RBP6.4□□□□□ -1.38
PDGFC-205ENST00000506880 GALR1P47211 349 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 CAMLGP49069 296 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 PRR20EP86478 221 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 PRR20CP86479 221 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 PRR20DP86480 221 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 PRR20BP86481 221 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 PRR20AP86496 221 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 OPCMLQ14982 345 aa6.4□□□□□ -1.38
PDGFC-205ENST00000506880 TIGITQ495A1 244 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms