RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ALMS1Q8TCU4 4167 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 MPTX1A8MV57 137 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 FAM90A26D6RGX4 464 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 DNASE2O00115 360 aaPredicted RBP6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 SFT2D2O95562 160 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 TOMM40O96008 361 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 HNRNPCP07910 306 aaKnown RBP eCLIP6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 PPP1R1AQ13522 171 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 SPANXN2Q5MJ10 180 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 C16orf54Q6UWD8 224 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 OR1S1Q8NH92 325 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 GATAD1Q8WUU5 269 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 ACY3Q96HD9 319 aa6.65□□□□□ -1.34
PDLIM5-209ENST00000506632 AGRNO00468 2067 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 IGKV1D-37A0A075B6S9 117 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 IL4P05112 153 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 GIG44P09565 113 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 RD3LP0DJH9 198 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 PSG1P11464 419 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 GPX4P36969 197 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 UBE2MP61081 183 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 RPL11P62913 178 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 GAMTQ14353 236 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 BAK1Q16611 211 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 LEMD1Q68G75 181 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 CENPSQ8N2Z9 138 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 STXBP6Q8NFX7 210 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 NARS2Q96I59 477 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 SDHCQ99643 169 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 RABAC1Q9UI14 185 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 TMED3Q9Y3Q3 217 aa6.64□□□□□ -1.35
PDLIM5-209ENST00000506632 HELTA6NFD8 242 aa6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 NAP1L6A6NFF2 107 aa6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 PRSS46E5RG02 174 aa6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 BUB3O43684 328 aa6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 JTBO76095 146 aa6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 IFNA4P05014 189 aa6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 AP2S1P53680 142 aaPredicted RBP6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 TRPT1Q86TN4 253 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 OR51G1Q8NGK1 321 aa6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 RNF125Q96EQ8 232 aa6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 RARRES2Q99969 163 aa6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 C11orf68Q9H3H3 251 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 SEPSECSQ9HD40 501 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 PLECQ15149 4684 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-209ENST00000506632 IGKV1OR2-108A0A075B7D4 117 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 C9orf170A2RU37 121 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 NUPR2A6NF83 97 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 SYNGR2O43760 224 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 MED6O75586 246 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 NDUFB6O95139 128 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 CA1P00915 261 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 ZNF688P0C7X2 276 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 IAPPP10997 89 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 BTCP35070 178 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 EIF2B2P49770 351 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 PMS2P11Q13670 270 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 GGNBP1Q5YKI7 109 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 OR8G2PQ6IF36 304 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 STHQ8IWL8 128 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 TMEM217Q8N7C4 229 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 THAP8Q8NA92 274 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 OR11H2Q8NH07 326 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 CIB3Q96Q77 187 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 NRN1Q9NPD7 142 aa6.62□□□□□ -1.35
PDLIM5-209ENST00000506632 CXorf65A6NEN9 183 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 ZFP92A6NM28 416 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 KNCNA6PVL3 124 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 HOXB5P09067 269 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 SPP1P10451 314 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 C4BPBP20851 252 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 NUP62P37198 522 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 RAB11AP62491 216 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 ZNF90Q03938 601 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 DHRS2Q13268 280 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 TMEM41BQ5BJD5 291 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 TRIQKQ629K1 86 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 MORN3Q6PF18 240 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 CEMP1Q6PRD7 247 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 SIGLEC15Q6ZMC9 328 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 SLC35E1Q96K37 410 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 TRGV9Q99603 122 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 C7orf50Q9BRJ6 194 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 FLVCR2Q9UPI3 526 aa6.61□□□□□ -1.35
PDLIM5-209ENST00000506632 HYDINQ4G0P3 5121 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 ZNF705EA8MWA4 302 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 ADAP1O75689 374 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 OR4E1P0C645 316 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 IL7P13232 177 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 PSMG4Q5JS54 123 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 C1orf194Q5T5A4 169 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 Q8NAQ8 132 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 CSNK1G2-AS1Q8NCQ2 148 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 OR4D5Q8NGN0 318 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 LINC00476Q8WZB0 136 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 RAB40CQ96S21 281 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 MAGT1Q9H0U3 335 aa6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 MRPL18Q9H0U6 180 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-209ENST00000506632 WRBO00258 174 aa6.59□□□□□ -1.35
PDLIM5-209ENST00000506632 SOCS3O14543 225 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms