RNA–Protein interactions for RNA: ENST00000505857.2

TOP1MT-202, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 1 (best)

Gene TOP1MT, Length 2,029 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-202ENST00000505857 C19orf24Q9BVV8 132 aa13.22□□□□□ -0.29
TOP1MT-202ENST00000505857 TPSG1Q9NRR2 321 aa13.22□□□□□ -0.29
TOP1MT-202ENST00000505857 NDUFA4L2Q9NRX3 87 aa13.22□□□□□ -0.29
TOP1MT-202ENST00000505857 PLXNB1O43157 2135 aa13.21□□□□□ -0.29
TOP1MT-202ENST00000505857 OOSP1A8MZH6 123 aa13.21□□□□□ -0.29
TOP1MT-202ENST00000505857 ERHP84090 104 aaKnown RBP13.21□□□□□ -0.29
TOP1MT-202ENST00000505857 JOSD1Q15040 202 aaPredicted RBP13.21□□□□□ -0.29
TOP1MT-202ENST00000505857 CACNG8Q8WXS5 425 aa13.21□□□□□ -0.29
TOP1MT-202ENST00000505857 C22orf15Q8WYQ4 148 aa13.21□□□□□ -0.29
TOP1MT-202ENST00000505857 EAF1Q96JC9 268 aaPredicted RBP13.21□□□□□ -0.29
TOP1MT-202ENST00000505857 BTF3L4Q96K17 158 aa13.21□□□□□ -0.29
TOP1MT-202ENST00000505857 OTOGQ6ZRI0 2925 aa13.21□□□□□ -0.29
TOP1MT-202ENST00000505857 GGCTO75223 188 aaKnown RBP13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 NDUFB4O95168 129 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 LINC00869P0C866 280 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 CD69Q07108 199 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 KCNIP4Q6PIL6 250 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 SEPSECSQ9HD40 501 aaKnown RBP13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 MDFIC2A0A1B0GVS7 189 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 SLC25A17O43808 307 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 FAM3BP58499 235 aaPredicted RBP13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 CCDC144NLQ6NUI1 221 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 TMEM183AQ8IXX5 376 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 PIFOQ8TCI5 191 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 C11orf52Q96A22 123 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 IMMP2LQ96T52 175 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 SMR3AQ99954 134 aa13.2□□□□□ -0.3
TOP1MT-202ENST00000505857 CYSRT1A8MQ03 144 aa13.19□□□□□ -0.3
TOP1MT-202ENST00000505857 PPP5D1E7EU14 171 aa13.19□□□□□ -0.3
TOP1MT-202ENST00000505857 CRYGBP07316 175 aa13.19□□□□□ -0.3
TOP1MT-202ENST00000505857 AREGP15514 252 aa13.19□□□□□ -0.3
TOP1MT-202ENST00000505857 PSG5Q15238 335 aa13.19□□□□□ -0.3
TOP1MT-202ENST00000505857 PDZD11Q5EBL8 140 aa13.19□□□□□ -0.3
TOP1MT-202ENST00000505857 TMEM167BQ9NRX6 74 aa13.19□□□□□ -0.3
TOP1MT-202ENST00000505857 FUT9Q9Y231 359 aa13.19□□□□□ -0.3
TOP1MT-202ENST00000505857 TYMSP04818 313 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 SPATA31B1PQ5VZV4 182 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 IL17RELQ6ZVW7 336 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 Q8N6K4 173 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 NECAP1Q8NC96 275 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 MEGF9Q9H1U4 602 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 A8MWP6 167 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 EBI3Q14213 229 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 COA6Q5JTJ3 125 aaKnown RBP13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 FAM78BQ5VT40 261 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 OR2T10Q8NGZ9 312 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 UHRF2Q96PU4 802 aa13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 YTHDF2Q9Y5A9 579 aaKnown RBP13.18□□□□□ -0.3
TOP1MT-202ENST00000505857 SCO2A0A1W2PP80 73 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 E7EUB6 86 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 MOSP00540 346 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 OR5G3P0C626 314 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 LGALS7P47929 136 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 HES1Q14469 280 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 VMA21Q3ZAQ7 101 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 PQLC2Q6ZP29 291 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 NDUFAF3Q9BU61 184 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 ELOVL1Q9BW60 279 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 PRO1933Q9H354 126 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 FBXL15Q9H469 300 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 TECRQ9NZ01 308 aaKnown RBP13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 IGKV1OR2-108A0A075B7D4 117 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 FCN1O00602 326 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 OR10J1P30954 320 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 TAS2R45P59539 299 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 OR10W1Q8NGF6 305 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 OR4X1Q8NH49 305 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 RNF2Q99496 336 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 NEU1Q99519 415 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 DERL1Q9BUN8 251 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 MRPL32Q9BYC8 188 aaKnown RBP13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 ZNF430Q9H8G1 570 aaPredicted RBP13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 LY96Q9Y6Y9 160 aa13.17□□□□□ -0.3
TOP1MT-202ENST00000505857 A0A1W2PPQ1 181 aa13.16□□□□□ -0.3
TOP1MT-202ENST00000505857 C9JCJ5 164 aa13.16□□□□□ -0.3
TOP1MT-202ENST00000505857 CD5LO43866 347 aa13.16□□□□□ -0.3
TOP1MT-202ENST00000505857 BTF3P20290 206 aaKnown RBP13.16□□□□□ -0.3
TOP1MT-202ENST00000505857 SUB1P53999 127 aaKnown RBP eCLIP13.16□□□□□ -0.3
TOP1MT-202ENST00000505857 DEFB112Q30KQ8 113 aa13.16□□□□□ -0.3
TOP1MT-202ENST00000505857 MIR17HGQ75NE6 70 aa13.16□□□□□ -0.3
TOP1MT-202ENST00000505857 MISP3Q96FF7 219 aa13.16□□□□□ -0.3
TOP1MT-202ENST00000505857 SIGLEC9Q9Y336 463 aa13.16□□□□□ -0.3
TOP1MT-202ENST00000505857 SONP18583 2426 aaKnown RBP13.16□□□□□ -0.3
TOP1MT-202ENST00000505857 GCGP01275 180 aa13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 GZMBP10144 247 aa13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 SSBP2P81877 361 aaPredicted RBP13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 MMDQ15546 238 aa13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 C10orf55Q5SWW7 151 aa13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 SFRP2Q96HF1 295 aa13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 CGB1A6NKQ9 187 aa13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 FOXL1Q12952 345 aa13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 MRPL41Q8IXM3 137 aaKnown RBP13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 NPBQ8NG41 125 aa13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 RNF5Q99942 180 aa13.15□□□□□ -0.3
TOP1MT-202ENST00000505857 TRBV20OR9-2A0A075B6H5 130 aa13.14□□□□□ -0.31
TOP1MT-202ENST00000505857 NDUFA3O95167 84 aa13.14□□□□□ -0.31
TOP1MT-202ENST00000505857 TMEM11P17152 192 aa13.14□□□□□ -0.31
TOP1MT-202ENST00000505857 BRS3P32247 399 aa13.14□□□□□ -0.31
TOP1MT-202ENST00000505857 ACTL10Q5JWF8 245 aa13.14□□□□□ -0.31
TOP1MT-202ENST00000505857 TEX45Q8NA69 505 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms