RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 THAP8Q8NA92 274 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 BPIFCQ8NFQ6 507 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 OR51G1Q8NGK1 321 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 SCGB1C1Q8TD33 95 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 TMEM190Q8WZ59 177 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 PPP1R14BQ96C90 147 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 METTL26Q96S19 204 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 ATP5SQ99766 215 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 DAZ1Q9NQZ3 744 aaKnown RBP6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 IGKV1D-37A0A075B6S9 117 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 IGHV3-49A0A0A0MS15 119 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 C2orf70A6NJV1 201 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 C17orf112F2Z3M2 114 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 K7EMT4 169 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 AGPAT2O15120 278 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 ARPC5O15511 151 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 CFDP00746 253 aaPredicted RBP6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 CSN3P07498 182 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 FOLR2P14207 255 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 ORM2P19652 201 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 CBLN1P23435 193 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 GATA2P23769 480 aaPredicted RBP6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 S100A7P31151 101 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 CAMLGP49069 296 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 INSL3P51460 131 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 SELENOTP62341 195 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 OXLD1Q5BKU9 147 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 BTNL8Q6UX41 500 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 Q6ZRG5 221 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 ZNF709Q8N972 641 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 OR1B1Q8NGR6 318 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 RNF125Q96EQ8 232 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 MFFQ9GZY8 342 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 MRPL27Q9P0M9 148 aaKnown RBP6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 PFDN2Q9UHV9 154 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 RABAC1Q9UI14 185 aa6.26□□□□□ -1.41
LIMCH1-206ENST00000505705 IGKV1OR2-108A0A075B7D4 117 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 IGHV3OR16-13A0A075B7E8 117 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 IGHV3-74A0A0B4J1X5 117 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 IGHV3-66A0A0C4DH42 116 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 A0A1W2PS18 150 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 A8MWP6 167 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 G3V4G9 280 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 MPDU1O75352 247 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 HNRNPCP07910 306 aaKnown RBP eCLIP6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 OR5G3P0C626 314 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 LINC00869P0C866 280 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 EDN2P20800 178 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 RPL11P62913 178 aaKnown RBP6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 ZNF266Q14584 549 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 VWC2Q2TAL6 325 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 RBPMS2Q6ZRY4 209 aaKnown RBP6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 S100A7AQ86SG5 101 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 MARC2Q969Z3 335 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 GRAMD2BQ96HH9 432 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 ST6GAL2Q96JF0 529 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 AQP10Q96PS8 301 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 MGST2Q99735 147 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 TMEM231Q9H6L2 316 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 ZFAND3Q9H8U3 227 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 DOK5Q9P104 306 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 ZMAT5Q9UDW3 170 aaKnown RBP6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 FBXL17Q9UF56 701 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 TNFSF18Q9UNG2 199 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 WDR83OSQ9Y284 106 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 SELENOKQ9Y6D0 94 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 ANK2Q01484 3957 aa6.25□□□□□ -1.41
LIMCH1-206ENST00000505705 BORCS7-ASMTA0A0B4J1R7 106 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 IGHV7-4-1A0A0J9YVY3 117 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 WI2-2373I1.2A0A1W2PRP0 233 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 TMEM213A2RRL7 107 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 HYPMO75409 117 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 B2MP61769 119 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 USF2Q15853 346 aaPredicted RBP6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 MIC13Q5XKP0 118 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 LAMTOR1Q6IAA8 161 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 IL34Q6ZMJ4 242 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 TMEM182Q6ZP80 229 aaPredicted RBP6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 TCTE3Q8IZS6 198 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 RHPN1-AS1Q9BWJ2 59 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 NPCDR1Q9BY65 106 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 WDR61Q9GZS3 305 aaKnown RBP6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 ARL6Q9H0F7 186 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 SIGLEC8Q9NYZ4 499 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 TECRQ9NZ01 308 aaKnown RBP6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 SMPXQ9UHP9 88 aa6.24□□□□□ -1.41
LIMCH1-206ENST00000505705 IGKV3-7A0A075B6H7 116 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 A0A0D9SG52 128 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 KANTRA0A1W2PQU2 76 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 RNF222A6NCQ9 220 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 HMSDA8MTL9 139 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 CHEK1O14757 476 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 TAAR5O14804 337 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 COX7A2P2O60397 106 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 PFDN1O60925 122 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 APOHP02749 345 aaPredicted RBP6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 CRYBB3P26998 211 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 EIF2B2P49770 351 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms