RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 BLCAPP62952 87 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 FAM90A2PQ658T7 463 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 CLRN3Q8NCR9 226 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 OR1B1Q8NGR6 318 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 FAM167A-AS1Q96KT0 104 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 SLC25A2Q9BXI2 301 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 GNG7O60262 68 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 IGF1P05019 195 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 PQLC2Q6ZP29 291 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 OR4F5Q8NH21 305 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 OR4F4Q96R69 305 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 ZNF355PQ9NSJ1 428 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 LINC00527Q9UJ94 153 aa12.81□□□□□ -0.36
HLA-A-208ENST00000496081 TRAV30A0A087WSZ9 112 aa12.8□□□□□ -0.36
HLA-A-208ENST00000496081 C11orf94C9JXX5 98 aa12.8□□□□□ -0.36
HLA-A-208ENST00000496081 OR7C2O60412 319 aa12.8□□□□□ -0.36
HLA-A-208ENST00000496081 HYPMO75409 117 aa12.8□□□□□ -0.36
HLA-A-208ENST00000496081 IGHV3-23P01764 117 aa12.8□□□□□ -0.36
HLA-A-208ENST00000496081 RD3LP0DJH9 198 aa12.8□□□□□ -0.36
HLA-A-208ENST00000496081 BTN1A1Q13410 526 aa12.8□□□□□ -0.36
HLA-A-208ENST00000496081 Q56UQ5 140 aa12.8□□□□□ -0.36
HLA-A-208ENST00000496081 LINC00305Q7Z4B0 112 aa12.8□□□□□ -0.36
HLA-A-208ENST00000496081 VN1R17PQ8TDU5 208 aa12.8□□□□□ -0.36
HLA-A-208ENST00000496081 FLNAP21333 2647 aaKnown RBP12.8□□□□□ -0.36
HLA-A-208ENST00000496081 NDUFS6O75380 124 aaKnown RBP12.79□□□□□ -0.36
HLA-A-208ENST00000496081 FABP1P07148 127 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 ATP5G3P48201 142 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 RHOGP84095 191 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 CST9LP1Q5W188 147 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 Q6YL49 198 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 Q6ZS46 218 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 YTHDF2Q9Y5A9 579 aaKnown RBP12.79□□□□□ -0.36
HLA-A-208ENST00000496081 PUS1Q9Y606 427 aaKnown RBP eCLIP12.79□□□□□ -0.36
HLA-A-208ENST00000496081 TMEM250H0YL14 139 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 H3BQ15 152 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 TOMM40O96008 361 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 FCGR2BP31994 310 aaPredicted RBP12.79□□□□□ -0.36
HLA-A-208ENST00000496081 KIAA0141Q14154 515 aaPredicted RBP12.79□□□□□ -0.36
HLA-A-208ENST00000496081 C15orf32Q32M92 178 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 NECAP1Q8NC96 275 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 OR5AU1Q8NGC0 362 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 OR5R1Q8NH85 324 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 MS4A10Q96PG2 267 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 TMEM167BQ9NRX6 74 aa12.79□□□□□ -0.36
HLA-A-208ENST00000496081 MXRA5Q9NR99 2828 aa12.78□□□□□ -0.36
HLA-A-208ENST00000496081 FAM74A7A6NL05 159 aa12.78□□□□□ -0.36
HLA-A-208ENST00000496081 OR10J4P0C629 311 aa12.78□□□□□ -0.36
HLA-A-208ENST00000496081 YPEL3P61236 119 aaPredicted RBP12.78□□□□□ -0.36
HLA-A-208ENST00000496081 LYZP61626 148 aa12.78□□□□□ -0.36
HLA-A-208ENST00000496081 OR51G1Q8NGK1 321 aa12.78□□□□□ -0.36
HLA-A-208ENST00000496081 SUN5Q8TC36 379 aa12.78□□□□□ -0.36
HLA-A-208ENST00000496081 TXN2Q99757 166 aa12.78□□□□□ -0.36
HLA-A-208ENST00000496081 CTSGP08311 255 aa12.77□□□□□ -0.36
HLA-A-208ENST00000496081 AWAT1Q58HT5 328 aa12.77□□□□□ -0.36
HLA-A-208ENST00000496081 ZNF491Q8N8L2 437 aa12.77□□□□□ -0.36
HLA-A-208ENST00000496081 ZNF502Q8TBZ5 544 aa12.77□□□□□ -0.36
HLA-A-208ENST00000496081 NOL4LQ96MY1 436 aaPredicted RBP12.77□□□□□ -0.36
HLA-A-208ENST00000496081 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.36
HLA-A-208ENST00000496081 C20orf24Q9BUV8 137 aa12.77□□□□□ -0.36
HLA-A-208ENST00000496081 PRDM13Q9H4Q3 707 aa12.77□□□□□ -0.36
HLA-A-208ENST00000496081 MRPL27Q9P0M9 148 aaKnown RBP12.77□□□□□ -0.36
HLA-A-208ENST00000496081 OR2T8A6NH00 312 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 M0R036 132 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 PDE6DO43924 150 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 PYYP10082 97 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 NPPCP23582 126 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 PPIFP30405 207 aaKnown RBP12.76□□□□□ -0.37
HLA-A-208ENST00000496081 NIPSNAP3BQ9BS92 247 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 OR51M1Q9H341 326 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 HIGD1AQ9Y241 93 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 TLN2Q9Y4G6 2542 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 AKAP9Q99996 3911 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 WI2-2373I1.2A0A1W2PRP0 233 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 DNASE2O00115 360 aaPredicted RBP12.76□□□□□ -0.37
HLA-A-208ENST00000496081 UBE2L3P68036 154 aaKnown RBP12.76□□□□□ -0.37
HLA-A-208ENST00000496081 FAM74A3Q4VXF1 159 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 CHRDL1Q9BU40 450 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 PAXXQ9BUH6 204 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 VPREB3Q9UKI3 123 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 ARL2-SNX15V9GYD0 113 aa12.76□□□□□ -0.37
HLA-A-208ENST00000496081 AP4M1O00189 453 aa12.75□□□□□ -0.37
HLA-A-208ENST00000496081 IL4P05112 153 aa12.75□□□□□ -0.37
HLA-A-208ENST00000496081 ADMP35318 185 aa12.75□□□□□ -0.37
HLA-A-208ENST00000496081 KRTAP1-1Q07627 177 aa12.75□□□□□ -0.37
HLA-A-208ENST00000496081 IL17RELQ6ZVW7 336 aa12.75□□□□□ -0.37
HLA-A-208ENST00000496081 Q8WTZ3 238 aa12.75□□□□□ -0.37
HLA-A-208ENST00000496081 RPUSD4Q96CM3 377 aaKnown RBP12.75□□□□□ -0.37
HLA-A-208ENST00000496081 RNF125Q96EQ8 232 aa12.75□□□□□ -0.37
HLA-A-208ENST00000496081 SLC25A39Q9BZJ4 359 aaPredicted RBP12.75□□□□□ -0.37
HLA-A-208ENST00000496081 PARLQ9H300 379 aa12.75□□□□□ -0.37
HLA-A-208ENST00000496081 C7orf77A4D0Y5 90 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 ZNF727A8MUV8 499 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 F6UZH7 168 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 NUPL2O15504 423 aaKnown RBP12.74□□□□□ -0.37
HLA-A-208ENST00000496081 HOXA3O43365 443 aaPredicted RBP12.74□□□□□ -0.37
HLA-A-208ENST00000496081 OR2C1O95371 312 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 ZNF674Q2M3X9 581 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 LEMD1Q68G75 181 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 TMEM88Q6PEY1 159 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 FXYD5Q96DB9 178 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms