RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 RPEL1Q2QD12 228 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 LAMTOR1Q6IAA8 161 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 CYP2G1PQ6ZSU1 146 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 ZNF709Q8N972 641 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 HSD17B11Q8NBQ5 300 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 OR11H1Q8NG94 326 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 TRGV9Q99603 122 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 WDR61Q9GZS3 305 aaKnown RBP10.31□□□□□ -0.76
MSH6-208ENST00000493177 IGKV1D-37A0A075B6S9 117 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 IGKV1OR2-108A0A075B7D4 117 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 C17orf112F2Z3M2 114 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 AGPAT2O15120 278 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 MPDU1O75352 247 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 JTBO76095 146 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 YIF1AO95070 293 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 OR2C1O95371 312 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 HOXD3P31249 432 aaPredicted RBP10.3□□□□□ -0.76
MSH6-208ENST00000493177 ADMP35318 185 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 RUNX1Q01196 453 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 ZNF90Q03938 601 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 ZNF616Q08AN1 781 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 Q8WTZ3 238 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 RAX2Q96IS3 184 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 MGST2Q99735 147 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 CYTL1Q9NRR1 136 aa10.3□□□□□ -0.76
MSH6-208ENST00000493177 LSM4Q9Y4Z0 139 aaKnown RBP10.3□□□□□ -0.76
MSH6-208ENST00000493177 IGKV1-17P01599 117 aa10.29□□□□□ -0.76
MSH6-208ENST00000493177 RD3LP0DJH9 198 aa10.29□□□□□ -0.76
MSH6-208ENST00000493177 ZP3P21754 424 aa10.29□□□□□ -0.76
MSH6-208ENST00000493177 GATA2P23769 480 aaPredicted RBP10.29□□□□□ -0.76
MSH6-208ENST00000493177 EIF5AP63241 154 aaKnown RBP10.29□□□□□ -0.76
MSH6-208ENST00000493177 ZNF600Q6ZNG1 722 aa10.29□□□□□ -0.76
MSH6-208ENST00000493177 BPIFCQ8NFQ6 507 aa10.29□□□□□ -0.76
MSH6-208ENST00000493177 RSG1Q9BU20 258 aa10.29□□□□□ -0.76
MSH6-208ENST00000493177 NPCDR1Q9BY65 106 aa10.29□□□□□ -0.76
MSH6-208ENST00000493177 PARD6GQ9BYG4 376 aaPredicted RBP10.29□□□□□ -0.76
MSH6-208ENST00000493177 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
MSH6-208ENST00000493177 TOMM40O96008 361 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 PSG1P11464 419 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 SLURP1P55000 103 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 YPEL3P61236 119 aaPredicted RBP10.28□□□□□ -0.76
MSH6-208ENST00000493177 LYZP61626 148 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 SELENOTP62341 195 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 FAM106AQ4KMX7 169 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 DEFB121Q5J5C9 76 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 MIC13Q5XKP0 118 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 GGTLC1Q9BX51 225 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 KCNIP2Q9NS61 270 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 ZMAT5Q9UDW3 170 aaKnown RBP10.28□□□□□ -0.76
MSH6-208ENST00000493177 PUS1Q9Y606 427 aaKnown RBP eCLIP10.28□□□□□ -0.76
MSH6-208ENST00000493177 PXMP4Q9Y6I8 212 aa10.28□□□□□ -0.76
MSH6-208ENST00000493177 ZNF320A2RRD8 509 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 IL4P05112 153 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 LINC00869P0C866 280 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 TPT1P13693 172 aaKnown RBP10.27□□□□□ -0.77
MSH6-208ENST00000493177 ATP6V0CP27449 155 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 B2MP61769 119 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 C9orf66Q5T8R8 295 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 TMEM182Q6ZP80 229 aaPredicted RBP10.27□□□□□ -0.77
MSH6-208ENST00000493177 SLC51BQ86UW2 128 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 STPG3Q8N7X2 389 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 OR51G1Q8NGK1 321 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 C20orf24Q9BUV8 137 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 PBDC1Q9BVG4 233 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 SLC45A2Q9UMX9 530 aa10.27□□□□□ -0.77
MSH6-208ENST00000493177 IGHV3OR16-8A0A075B7F1 116 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 SEC14L6B5MCN3 397 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 NDUFA4O00483 81 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 ORM2P19652 201 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 RPL29P47914 159 aaKnown RBP10.26□□□□□ -0.77
MSH6-208ENST00000493177 ELLP55199 621 aaPredicted RBP10.26□□□□□ -0.77
MSH6-208ENST00000493177 SYNJ2BPP57105 145 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 FFAR4Q5NUL3 377 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 TOMM20LQ6UXN7 152 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 Q6ZRG5 221 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 OR1B1Q8NGR6 318 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 GNPNAT1Q96EK6 184 aaPredicted RBP10.26□□□□□ -0.77
MSH6-208ENST00000493177 GINS3Q9BRX5 216 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 SH3BGRL3Q9H299 93 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 DOK5Q9P104 306 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 TIMM9Q9Y5J7 89 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 RFNGQ9Y644 331 aa10.26□□□□□ -0.77
MSH6-208ENST00000493177 ZNF207O43670 478 aaKnown RBP10.25□□□□□ -0.77
MSH6-208ENST00000493177 CFDP00746 253 aaPredicted RBP10.25□□□□□ -0.77
MSH6-208ENST00000493177 GPHB5Q86YW7 130 aa10.25□□□□□ -0.77
MSH6-208ENST00000493177 BAP18Q8IXM2 172 aa10.25□□□□□ -0.77
MSH6-208ENST00000493177 OR2G3Q8NGZ4 309 aa10.25□□□□□ -0.77
MSH6-208ENST00000493177 ST8SIA2Q92186 375 aa10.25□□□□□ -0.77
MSH6-208ENST00000493177 RNF125Q96EQ8 232 aa10.25□□□□□ -0.77
MSH6-208ENST00000493177 SLC25A32Q9H2D1 315 aa10.25□□□□□ -0.77
MSH6-208ENST00000493177 SLC39A9Q9NUM3 307 aa10.25□□□□□ -0.77
MSH6-208ENST00000493177 VWFP04275 2813 aa10.25□□□□□ -0.77
MSH6-208ENST00000493177 COX7A2P2O60397 106 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 OR5G3P0C626 314 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 KRTAP10-11P60412 298 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 PRR20EP86478 221 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 PRR20CP86479 221 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 PRR20DP86480 221 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 PRR20BP86481 221 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 PRR20AP86496 221 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms