RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 OR51G1Q8NGK1 321 aa13.12□□□□□ -0.31
HMGN1-219ENST00000491183 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-219ENST00000491183 SRRQ9GZT4 340 aa13.12□□□□□ -0.31
HMGN1-219ENST00000491183 PIGBOS1A0A0B4J2F0 54 aa13.11□□□□□ -0.31
HMGN1-219ENST00000491183 DEFB4AO15263 64 aa13.11□□□□□ -0.31
HMGN1-219ENST00000491183 IAPPP10997 89 aa13.11□□□□□ -0.31
HMGN1-219ENST00000491183 SLC25A6P12236 298 aa13.11□□□□□ -0.31
HMGN1-219ENST00000491183 ZNF90Q03938 601 aa13.11□□□□□ -0.31
HMGN1-219ENST00000491183 ACTL10Q5JWF8 245 aa13.11□□□□□ -0.31
HMGN1-219ENST00000491183 RNF125Q96EQ8 232 aa13.11□□□□□ -0.31
HMGN1-219ENST00000491183 RAB40CQ96S21 281 aa13.11□□□□□ -0.31
HMGN1-219ENST00000491183 C11orf68Q9H3H3 251 aaKnown RBP13.11□□□□□ -0.31
HMGN1-219ENST00000491183 FAM90A26D6RGX4 464 aa13.1□□□□□ -0.31
HMGN1-219ENST00000491183 ZNF701M0R085 212 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-219ENST00000491183 C4BPBP20851 252 aa13.1□□□□□ -0.31
HMGN1-219ENST00000491183 NANOS2P60321 138 aaKnown RBP13.1□□□□□ -0.31
HMGN1-219ENST00000491183 BAK1Q16611 211 aa13.1□□□□□ -0.31
HMGN1-219ENST00000491183 PSMG4Q5JS54 123 aa13.1□□□□□ -0.31
HMGN1-219ENST00000491183 CENPSQ8N2Z9 138 aa13.1□□□□□ -0.31
HMGN1-219ENST00000491183 KLK5Q9Y337 293 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-219ENST00000491183 TMED3Q9Y3Q3 217 aa13.1□□□□□ -0.31
HMGN1-219ENST00000491183 ZFP92A6NM28 416 aa13.09□□□□□ -0.31
HMGN1-219ENST00000491183 LY6G6CO95867 125 aa13.09□□□□□ -0.31
HMGN1-219ENST00000491183 HOXB5P09067 269 aa13.09□□□□□ -0.31
HMGN1-219ENST00000491183 SPP1P10451 314 aa13.09□□□□□ -0.31
HMGN1-219ENST00000491183 MORN3Q6PF18 240 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-219ENST00000491183 SIGLEC15Q6ZMC9 328 aa13.09□□□□□ -0.31
HMGN1-219ENST00000491183 SLC35E1Q96K37 410 aa13.09□□□□□ -0.31
HMGN1-219ENST00000491183 MAGT1Q9H0U3 335 aa13.09□□□□□ -0.31
HMGN1-219ENST00000491183 NRN1Q9NPD7 142 aa13.09□□□□□ -0.31
HMGN1-219ENST00000491183 IGKV1OR2-108A0A075B7D4 117 aa13.08□□□□□ -0.32
HMGN1-219ENST00000491183 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.32
HMGN1-219ENST00000491183 GGNBP1Q5YKI7 109 aa13.08□□□□□ -0.32
HMGN1-219ENST00000491183 Q8NAQ8 132 aa13.08□□□□□ -0.32
HMGN1-219ENST00000491183 CSNK1G2-AS1Q8NCQ2 148 aa13.08□□□□□ -0.32
HMGN1-219ENST00000491183 C11orf45Q8TAV5 145 aa13.08□□□□□ -0.32
HMGN1-219ENST00000491183 PBDC1Q9BVG4 233 aa13.08□□□□□ -0.32
HMGN1-219ENST00000491183 PRSS46E5RG02 174 aa13.07□□□□□ -0.32
HMGN1-219ENST00000491183 WRBO00258 174 aa13.07□□□□□ -0.32
HMGN1-219ENST00000491183 SYNGR2O43760 224 aa13.07□□□□□ -0.32
HMGN1-219ENST00000491183 MED6O75586 246 aa13.07□□□□□ -0.32
HMGN1-219ENST00000491183 RBMY1A1P0DJD3 496 aaKnown RBP13.07□□□□□ -0.32
HMGN1-219ENST00000491183 RBMY1CP0DJD4 496 aa13.07□□□□□ -0.32
HMGN1-219ENST00000491183 RAB11AP62491 216 aa13.07□□□□□ -0.32
HMGN1-219ENST00000491183 RBMY1FQ15415 496 aaKnown RBP13.07□□□□□ -0.32
HMGN1-219ENST00000491183 TMEM41BQ5BJD5 291 aa13.07□□□□□ -0.32
HMGN1-219ENST00000491183 OR8G2PQ6IF36 304 aa13.07□□□□□ -0.32
HMGN1-219ENST00000491183 SDHCQ99643 169 aaPredicted RBP13.07□□□□□ -0.32
HMGN1-219ENST00000491183 SEPSECSQ9HD40 501 aaKnown RBP13.07□□□□□ -0.32
HMGN1-219ENST00000491183 X6R8D5 127 aa13.07□□□□□ -0.32
HMGN1-219ENST00000491183 C9orf170A2RU37 121 aa13.06□□□□□ -0.32
HMGN1-219ENST00000491183 ZNF705EA8MWA4 302 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-219ENST00000491183 SNRPGP15A8MWD9 76 aa13.06□□□□□ -0.32
HMGN1-219ENST00000491183 NDUFB6O95139 128 aa13.06□□□□□ -0.32
HMGN1-219ENST00000491183 OR2F1Q13607 317 aa13.06□□□□□ -0.32
HMGN1-219ENST00000491183 THAP8Q8NA92 274 aa13.06□□□□□ -0.32
HMGN1-219ENST00000491183 TRGV9Q99603 122 aa13.06□□□□□ -0.32
HMGN1-219ENST00000491183 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
HMGN1-219ENST00000491183 FBXL17Q9UF56 701 aa13.06□□□□□ -0.32
HMGN1-219ENST00000491183 PAIP2BQ9ULR5 123 aaKnown RBP13.06□□□□□ -0.32
HMGN1-219ENST00000491183 FLVCR2Q9UPI3 526 aa13.06□□□□□ -0.32
HMGN1-219ENST00000491183 IGHV4-28A0A0C4DH34 117 aa13.05□□□□□ -0.32
HMGN1-219ENST00000491183 ADAP1O75689 374 aa13.05□□□□□ -0.32
HMGN1-219ENST00000491183 UBE2MP61081 183 aaKnown RBP13.05□□□□□ -0.32
HMGN1-219ENST00000491183 LYZP61626 148 aa13.05□□□□□ -0.32
HMGN1-219ENST00000491183 SNRPD3P62318 126 aaKnown RBP13.05□□□□□ -0.32
HMGN1-219ENST00000491183 GSG1LQ6UXU4 331 aa13.05□□□□□ -0.32
HMGN1-219ENST00000491183 CIB3Q96Q77 187 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-219ENST00000491183 WDR12Q9GZL7 423 aaKnown RBP13.05□□□□□ -0.32
HMGN1-219ENST00000491183 MFFQ9GZY8 342 aa13.05□□□□□ -0.32
HMGN1-219ENST00000491183 LINC00854A0A1B0GVQ3 168 aa13.04□□□□□ -0.32
HMGN1-219ENST00000491183 NAP1L6A6NFF2 107 aa13.04□□□□□ -0.32
HMGN1-219ENST00000491183 H3BMM0 161 aa13.04□□□□□ -0.32
HMGN1-219ENST00000491183 ID3Q02535 119 aa13.04□□□□□ -0.32
HMGN1-219ENST00000491183 PFDN2Q9UHV9 154 aa13.04□□□□□ -0.32
HMGN1-219ENST00000491183 FABP1P07148 127 aa13.03□□□□□ -0.32
HMGN1-219ENST00000491183 MIFP14174 115 aa13.03□□□□□ -0.32
HMGN1-219ENST00000491183 BTCP35070 178 aa13.03□□□□□ -0.32
HMGN1-219ENST00000491183 NUP62P37198 522 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-219ENST00000491183 INPP1P49441 399 aa13.03□□□□□ -0.32
HMGN1-219ENST00000491183 DEFB1P60022 68 aa13.03□□□□□ -0.32
HMGN1-219ENST00000491183 RPP30P78346 268 aaKnown RBP13.03□□□□□ -0.32
HMGN1-219ENST00000491183 SPANXN5Q5MJ07 72 aa13.03□□□□□ -0.32
HMGN1-219ENST00000491183 C1orf194Q5T5A4 169 aa13.03□□□□□ -0.32
HMGN1-219ENST00000491183 GDF5OSQ5U4N7 250 aa13.03□□□□□ -0.32
HMGN1-219ENST00000491183 TRIQKQ629K1 86 aa13.03□□□□□ -0.32
HMGN1-219ENST00000491183 BIRC6Q9NR09 4857 aa13.03□□□□□ -0.32
HMGN1-219ENST00000491183 ELOA3CA0A087WX78 387 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-219ENST00000491183 H3BP45 60 aa13.02□□□□□ -0.33
HMGN1-219ENST00000491183 SOCS3O14543 225 aa13.02□□□□□ -0.33
HMGN1-219ENST00000491183 NKX2-1P43699 371 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-219ENST00000491183 TMEM182Q6ZP80 229 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-219ENST00000491183 HRH4Q9H3N8 390 aa13.02□□□□□ -0.33
HMGN1-219ENST00000491183 OR4E1P0C645 316 aa13.01□□□□□ -0.33
HMGN1-219ENST00000491183 HLA-DRB4P13762 266 aa13.01□□□□□ -0.33
HMGN1-219ENST00000491183 ANXA7P20073 488 aaKnown RBP13.01□□□□□ -0.33
HMGN1-219ENST00000491183 GATA2P23769 480 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-219ENST00000491183 POLR2GP62487 172 aaKnown RBP eCLIP13.01□□□□□ -0.33
HMGN1-219ENST00000491183 XCL2Q9UBD3 114 aa13.01□□□□□ -0.33
HMGN1-219ENST00000491183 TBC1D24Q9ULP9 559 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms