RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TEX13DA0A0J9YY54 714 aaPredicted RBP13.84□□□□□ -0.19
SMPDL3A-202ENST00000487215 SMIM9A6NGZ8 99 aa13.84□□□□□ -0.19
SMPDL3A-202ENST00000487215 CDS2O95674 445 aa13.84□□□□□ -0.19
SMPDL3A-202ENST00000487215 GDF5OSQ5U4N7 250 aa13.84□□□□□ -0.19
SMPDL3A-202ENST00000487215 SIGLEC15Q6ZMC9 328 aa13.84□□□□□ -0.19
SMPDL3A-202ENST00000487215 DKK2Q9UBU2 259 aa13.84□□□□□ -0.19
SMPDL3A-202ENST00000487215 IGHV3OR16-12A0A075B7B8 117 aa13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 BUB3O43684 328 aa13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 IGKV3-20P01619 116 aa13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 SLC25A4P12235 298 aa13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 NKX2-1P43699 371 aaPredicted RBP13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 FXYD7P58549 80 aa13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 DEFB1P60022 68 aa13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 AARDQ4LEZ3 155 aa13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 GPR141Q7Z602 305 aa13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 RBPMSQ93062 196 aaKnown RBP13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 RFNGQ9Y644 331 aa13.83□□□□□ -0.2
SMPDL3A-202ENST00000487215 OR5AC1P0C628 307 aa13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 SMIM18P0DKX4 95 aa13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 RNF212Q495C1 297 aa13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 C2orf83Q53S99 150 aa13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 C1orf134Q5TEV5 83 aa13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 FAM222AQ5U5X8 452 aa13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 NOXA1Q86UR1 476 aa13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 RNASEH2CQ8TDP1 164 aaKnown RBP13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 NIPSNAP3BQ9BS92 247 aa13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 MRPS26Q9BYN8 205 aaKnown RBP13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 NAA60Q9H7X0 242 aa13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 HEYLQ9NQ87 328 aaPredicted RBP13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 PLA2G2EQ9NZK7 142 aa13.82□□□□□ -0.2
SMPDL3A-202ENST00000487215 TEX48A0A1B0GUV7 120 aa13.81□□□□□ -0.2
SMPDL3A-202ENST00000487215 GSTZ1O43708 216 aaPredicted RBP13.81□□□□□ -0.2
SMPDL3A-202ENST00000487215 NXPH3O95157 252 aa13.81□□□□□ -0.2
SMPDL3A-202ENST00000487215 HTN3P15516 51 aa13.81□□□□□ -0.2
SMPDL3A-202ENST00000487215 SLC24A4Q8NFF2 622 aa13.81□□□□□ -0.2
SMPDL3A-202ENST00000487215 GLYATL2Q8WU03 294 aa13.81□□□□□ -0.2
SMPDL3A-202ENST00000487215 TMEM170AQ8WVE7 144 aa13.81□□□□□ -0.2
SMPDL3A-202ENST00000487215 SMIM4Q8WVI0 70 aa13.81□□□□□ -0.2
SMPDL3A-202ENST00000487215 PRRT1Q99946 306 aa13.81□□□□□ -0.2
SMPDL3A-202ENST00000487215 RTBDNQ9BSG5 229 aaPredicted RBP13.81□□□□□ -0.2
SMPDL3A-202ENST00000487215 CTDSPLO15194 276 aa13.8□□□□□ -0.2
SMPDL3A-202ENST00000487215 TOMM40O96008 361 aa13.8□□□□□ -0.2
SMPDL3A-202ENST00000487215 AKAIN1P0CW23 69 aa13.8□□□□□ -0.2
SMPDL3A-202ENST00000487215 ETFRF1Q6IPR1 90 aa13.8□□□□□ -0.2
SMPDL3A-202ENST00000487215 NPIPB3Q92617 1050 aa13.8□□□□□ -0.2
SMPDL3A-202ENST00000487215 SCGB3A2Q96PL1 93 aa13.8□□□□□ -0.2
SMPDL3A-202ENST00000487215 MIXL1Q9H2W2 232 aa13.8□□□□□ -0.2
SMPDL3A-202ENST00000487215 KCNIP3Q9Y2W7 256 aa13.8□□□□□ -0.2
SMPDL3A-202ENST00000487215 LRP1BQ9NZR2 4599 aa13.8□□□□□ -0.2
SMPDL3A-202ENST00000487215 CEBPZOSA8MTT3 80 aa13.79□□□□□ -0.2
SMPDL3A-202ENST00000487215 RD3LP0DJH9 198 aa13.79□□□□□ -0.2
SMPDL3A-202ENST00000487215 SELENOHQ8IZQ5 122 aaKnown RBP13.79□□□□□ -0.2
SMPDL3A-202ENST00000487215 ZNF709Q8N972 641 aa13.79□□□□□ -0.2
SMPDL3A-202ENST00000487215 DIRAS2Q96HU8 199 aa13.79□□□□□ -0.2
SMPDL3A-202ENST00000487215 SAV1Q9H4B6 383 aaPredicted RBP13.79□□□□□ -0.2
SMPDL3A-202ENST00000487215 CACNG5Q9UF02 275 aa13.79□□□□□ -0.2
SMPDL3A-202ENST00000487215 CRYM-AS1A6NIL9 109 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 CTDSP2O14595 271 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 PSG1P11464 419 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 IL18Q14116 193 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 OXA1LQ15070 435 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 TMEM268Q5VZI3 342 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 TMEM88Q6PEY1 159 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 FOXI2Q6ZQN5 318 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 OR51G1Q8NGK1 321 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 LHFPL5Q8TAF8 219 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 IL22RA2Q969J5 263 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 ACY3Q96HD9 319 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 LINC00052Q96N35 136 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 WDR12Q9GZL7 423 aaKnown RBP13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 GPR132Q9UNW8 380 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 TMEM56-RWDD3S4R434 201 aa13.78□□□□□ -0.2
SMPDL3A-202ENST00000487215 PIGBOS1A0A0B4J2F0 54 aa13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 ALDH3B2P48448 385 aa13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 FAAP20Q6NZ36 180 aa13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 OR4C16Q8NGL9 310 aa13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 RAB2BQ8WUD1 216 aa13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 GPR146Q96CH1 333 aa13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 CLUHP3Q96NS8 147 aa13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 BCL7BQ9BQE9 202 aa13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 SLC35B3Q9H1N7 401 aa13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 SCP2D1Q9UJQ7 156 aa13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 YTHDF2Q9Y5A9 579 aaKnown RBP13.77□□□□□ -0.21
SMPDL3A-202ENST00000487215 LOC102723971A0A1B0GUV8 181 aa13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 C16orf90A8MZG2 172 aa13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 SULT1A3P0DMM9 295 aa13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 SULT1A4P0DMN0 295 aa13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 TNP2Q05952 138 aa13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 CLVS1Q8IUQ0 354 aaPredicted RBP13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 C1orf158Q8N1D5 194 aa13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 OR4B1Q8NGF8 309 aa13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 RNF125Q96EQ8 232 aa13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 CCDC59Q9P031 241 aaKnown RBP13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 RSL24D1Q9UHA3 163 aaKnown RBP13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 GOLT1BQ9Y3E0 138 aa13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 NACAE9PAV3 2078 aa13.76□□□□□ -0.21
SMPDL3A-202ENST00000487215 SOCS3O14543 225 aa13.75□□□□□ -0.21
SMPDL3A-202ENST00000487215 CDK2AP2O75956 126 aa13.75□□□□□ -0.21
SMPDL3A-202ENST00000487215 HBE1P02100 147 aa13.75□□□□□ -0.21
SMPDL3A-202ENST00000487215 NUP62P37198 522 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms