RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 IGLV1-40P01703 118 aa8.83□□□□□ -1
SND1-212ENST00000485871 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
SND1-212ENST00000485871 KRTAP24-1Q3LI83 254 aa8.83□□□□□ -1
SND1-212ENST00000485871 AWAT1Q58HT5 328 aa8.83□□□□□ -1
SND1-212ENST00000485871 TMEM144Q7Z5S9 345 aa8.83□□□□□ -1
SND1-212ENST00000485871 OR1L6Q8NGR2 347 aa8.83□□□□□ -1
SND1-212ENST00000485871 RXFP4Q8TDU9 374 aa8.83□□□□□ -1
SND1-212ENST00000485871 TVP23CQ96ET8 276 aa8.83□□□□□ -1
SND1-212ENST00000485871 SLC35E1Q96K37 410 aa8.83□□□□□ -1
SND1-212ENST00000485871 JMJD8Q96S16 334 aa8.83□□□□□ -1
SND1-212ENST00000485871 RARRES2Q99969 163 aa8.83□□□□□ -1
SND1-212ENST00000485871 VSIRQ9H7M9 311 aa8.83□□□□□ -1
SND1-212ENST00000485871 RPS10P5Q9NQ39 176 aa8.83□□□□□ -1
SND1-212ENST00000485871 LSM4Q9Y4Z0 139 aaKnown RBP8.83□□□□□ -1
SND1-212ENST00000485871 ZFP92A6NM28 416 aa8.82□□□□□ -1
SND1-212ENST00000485871 H3BUA1 57 aa8.82□□□□□ -1
SND1-212ENST00000485871 NDUFB8O95169 186 aa8.82□□□□□ -1
SND1-212ENST00000485871 MT-CO2P00403 227 aa8.82□□□□□ -1
SND1-212ENST00000485871 ATF4P18848 351 aaPredicted RBP8.82□□□□□ -1
SND1-212ENST00000485871 MEF2BQ02080 365 aaPredicted RBP8.82□□□□□ -1
SND1-212ENST00000485871 FAM122CQ6P4D5 195 aa8.82□□□□□ -1
SND1-212ENST00000485871 SLC16A13Q7RTY0 426 aa8.82□□□□□ -1
SND1-212ENST00000485871 WIPF2Q8TF74 440 aaPredicted RBP8.82□□□□□ -1
SND1-212ENST00000485871 RAB24Q969Q5 203 aa8.82□□□□□ -1
SND1-212ENST00000485871 RNF2Q99496 336 aa8.82□□□□□ -1
SND1-212ENST00000485871 GGTLC1Q9BX51 225 aa8.82□□□□□ -1
SND1-212ENST00000485871 C16orf95Q9H693 158 aa8.82□□□□□ -1
SND1-212ENST00000485871 PXMP4Q9Y6I8 212 aa8.82□□□□□ -1
SND1-212ENST00000485871 IGKV1OR2-108A0A075B7D4 117 aa8.81□□□□□ -1
SND1-212ENST00000485871 C7orf77A4D0Y5 90 aa8.81□□□□□ -1
SND1-212ENST00000485871 CXorf65A6NEN9 183 aa8.81□□□□□ -1
SND1-212ENST00000485871 F8W735 103 aaPredicted RBP8.81□□□□□ -1
SND1-212ENST00000485871 H3BQ15 152 aa8.81□□□□□ -1
SND1-212ENST00000485871 TCF21O43680 179 aa8.81□□□□□ -1
SND1-212ENST00000485871 OR2J3O76001 311 aa8.81□□□□□ -1
SND1-212ENST00000485871 HIST1H1BP16401 226 aaKnown RBP8.81□□□□□ -1
SND1-212ENST00000485871 RHOBP62745 196 aa8.81□□□□□ -1
SND1-212ENST00000485871 FLI1Q01543 452 aaPredicted RBP8.81□□□□□ -1
SND1-212ENST00000485871 GAMTQ14353 236 aa8.81□□□□□ -1
SND1-212ENST00000485871 RNF212Q495C1 297 aa8.81□□□□□ -1
SND1-212ENST00000485871 ETFRF1Q6IPR1 90 aa8.81□□□□□ -1
SND1-212ENST00000485871 C10orf99Q6UWK7 81 aa8.81□□□□□ -1
SND1-212ENST00000485871 CYB561D1Q8N8Q1 229 aa8.81□□□□□ -1
SND1-212ENST00000485871 MISP3Q96FF7 219 aa8.81□□□□□ -1
SND1-212ENST00000485871 MGST2Q99735 147 aa8.81□□□□□ -1
SND1-212ENST00000485871 SLC25A22Q9H936 323 aa8.81□□□□□ -1
SND1-212ENST00000485871 ARL2-SNX15V9GYD0 113 aa8.81□□□□□ -1
SND1-212ENST00000485871 IGKV1D-37A0A075B6S9 117 aa8.8□□□□□ -1
SND1-212ENST00000485871 NUPL2O15504 423 aaKnown RBP8.8□□□□□ -1
SND1-212ENST00000485871 PDE6DO43924 150 aa8.8□□□□□ -1
SND1-212ENST00000485871 NDUFA7O95182 113 aa8.8□□□□□ -1
SND1-212ENST00000485871 CXorf1O96002 111 aa8.8□□□□□ -1
SND1-212ENST00000485871 IGHG4P01861 327 aa8.8□□□□□ -1
SND1-212ENST00000485871 MT-ND4LP03901 98 aa8.8□□□□□ -1
SND1-212ENST00000485871 DEFA4P12838 97 aa8.8□□□□□ -1
SND1-212ENST00000485871 FOLR2P14207 255 aa8.8□□□□□ -1
SND1-212ENST00000485871 PSMB8P28062 276 aa8.8□□□□□ -1
SND1-212ENST00000485871 FGF8P55075 233 aaPredicted RBP8.8□□□□□ -1
SND1-212ENST00000485871 B2MP61769 119 aa8.8□□□□□ -1
SND1-212ENST00000485871 KIAA0141Q14154 515 aaPredicted RBP8.8□□□□□ -1
SND1-212ENST00000485871 TMEM88Q6PEY1 159 aa8.8□□□□□ -1
SND1-212ENST00000485871 SSX7Q7RTT5 188 aa8.8□□□□□ -1
SND1-212ENST00000485871 CBLN2Q8IUK8 224 aa8.8□□□□□ -1
SND1-212ENST00000485871 TMEM116Q8NCL8 245 aa8.8□□□□□ -1
SND1-212ENST00000485871 OR2T6Q8NHC8 308 aa8.8□□□□□ -1
SND1-212ENST00000485871 MYOZ3Q8TDC0 251 aa8.8□□□□□ -1
SND1-212ENST00000485871 PUS1Q9Y606 427 aaKnown RBP eCLIP8.8□□□□□ -1
SND1-212ENST00000485871 IGHV3-21A0A0B4J1V1 117 aa8.79□□□□□ -1
SND1-212ENST00000485871 LOC105371267A0A1B0GV96 52 aa8.79□□□□□ -1
SND1-212ENST00000485871 TMEM89A2RUT3 159 aa8.79□□□□□ -1
SND1-212ENST00000485871 F6UZH7 168 aa8.79□□□□□ -1
SND1-212ENST00000485871 IGHV3-48P01763 117 aa8.79□□□□□ -1
SND1-212ENST00000485871 STAG3L2P0CL84 134 aa8.79□□□□□ -1
SND1-212ENST00000485871 STAG3L3P0CL85 134 aa8.79□□□□□ -1
SND1-212ENST00000485871 RHOGP84095 191 aa8.79□□□□□ -1
SND1-212ENST00000485871 RNF152Q8N8N0 203 aa8.79□□□□□ -1
SND1-212ENST00000485871 THAP8Q8NA92 274 aa8.79□□□□□ -1
SND1-212ENST00000485871 NECAP1Q8NC96 275 aa8.79□□□□□ -1
SND1-212ENST00000485871 OR4X1Q8NH49 305 aa8.79□□□□□ -1
SND1-212ENST00000485871 VN1R17PQ8TDU5 208 aa8.79□□□□□ -1
SND1-212ENST00000485871 ZNF414Q96IQ9 312 aa8.79□□□□□ -1
SND1-212ENST00000485871 CTDSP1Q9GZU7 261 aa8.79□□□□□ -1
SND1-212ENST00000485871 KLK15Q9H2R5 256 aa8.79□□□□□ -1
SND1-212ENST00000485871 TMEM242Q9NWH2 141 aa8.79□□□□□ -1
SND1-212ENST00000485871 THYN1Q9P016 225 aa8.79□□□□□ -1
SND1-212ENST00000485871 FBXL7Q9UJT9 491 aa8.79□□□□□ -1
SND1-212ENST00000485871 CUBNO60494 3623 aa8.79□□□□□ -1
SND1-212ENST00000485871 PSMB11A5LHX3 300 aa8.78□□□□□ -1
SND1-212ENST00000485871 FAM223BA6NKX1 122 aa8.78□□□□□ -1
SND1-212ENST00000485871 CLN5O75503 358 aa8.78□□□□□ -1
SND1-212ENST00000485871 YIF1AO95070 293 aa8.78□□□□□ -1
SND1-212ENST00000485871 FCGR2BP31994 310 aaPredicted RBP8.78□□□□□ -1
SND1-212ENST00000485871 RND2P52198 227 aa8.78□□□□□ -1
SND1-212ENST00000485871 TAS2R45P59539 299 aa8.78□□□□□ -1
SND1-212ENST00000485871 SELENOTP62341 195 aa8.78□□□□□ -1
SND1-212ENST00000485871 PRR20EP86478 221 aa8.78□□□□□ -1
SND1-212ENST00000485871 PRR20CP86479 221 aa8.78□□□□□ -1
SND1-212ENST00000485871 PRR20DP86480 221 aa8.78□□□□□ -1
SND1-212ENST00000485871 PRR20BP86481 221 aa8.78□□□□□ -1
SND1-212ENST00000485871 PRR20AP86496 221 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms