RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SUMF1Q8NBK3 374 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 OR10AD1Q8NGE0 317 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 OR1N2Q8NGR9 330 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 BORCS8Q96FH0 119 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 TMEM101Q96IK0 257 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 C1QTNF4Q9BXJ3 329 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 SPRY4Q9C004 299 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 SLC25A31Q9H0C2 315 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 TMEM222Q9H0R3 208 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 LAMTOR3Q9UHA4 124 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 HIGD1AQ9Y241 93 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 ASCC3Q8N3C0 2202 aaKnown RBP3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 SPTBN5Q9NRC6 3674 aaKnown RBP3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 RALGAPA1Q6GYQ0 2036 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 SHANK1Q9Y566 2161 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 IGKV3D-15A0A087WSY6 115 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 TRAV5A0A0B4J249 113 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 A0A0J9YW62 118 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 C5orf49A4QMS7 147 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 NCBP2LA6PVI3 153 aaKnown RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF850A8MQ14 1090 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 NTN3O00634 580 aaPredicted RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF207O43670 478 aaKnown RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 KLF7O75840 302 aaPredicted RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 PPYP01298 95 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 HSPB1P04792 205 aaKnown RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 SOD3P08294 240 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 SNRPCP09234 159 aaKnown RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 PGA5P0DJD9 388 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 CCL3P10147 92 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF32P17041 273 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 VDAC1P21796 283 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 ATP6V0CP27449 155 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 LHX2P50458 406 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 RBM11P57052 281 aaKnown RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 LINC00205P59089 165 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 FGF12P61328 243 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 RHOGP84095 191 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF92Q03936 586 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 MEF2CQ06413 473 aaPredicted RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 MPV17LQ2QL34 196 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 ABCA11PQ4W5N1 156 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 TTC32Q5I0X7 151 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 PAPPA-AS1Q5QFB9 102 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 GUSBP11Q6P575 273 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 RASL11AQ6T310 242 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 SCGB1D4Q6XE38 83 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 Q6ZN92 141 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 LYZL2Q7Z4W2 148 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 RPS19BP1Q86WX3 136 aaKnown RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 DEFB119Q8N690 84 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 TMEM178AQ8NBL3 297 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 SECTM1Q8WVN6 248 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 SRSF12Q8WXF0 261 aaKnown RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 RBMXL1Q96E39 390 aaKnown RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 GNPNAT1Q96EK6 184 aaPredicted RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 CYYR1Q96J86 154 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 AP1S3Q96PC3 154 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 SIGLEC12Q96PQ1 595 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 HDHD3Q9BSH5 251 aaPredicted RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 SRXN1Q9BYN0 137 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 PLEKHF2Q9H8W4 249 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 TMEM242Q9NWH2 141 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 BOKQ9UMX3 212 aaPredicted RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 YTHDF2Q9Y5A9 579 aaKnown RBP3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 SELENOKQ9Y6D0 94 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 ABCA7Q8IZY2 2146 aa3.18□□□□□ -1.9
PRPF38B-205ENST00000485810 CEP290O15078 2479 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 LOC102724200A0A096LPH7 203 aaPredicted RBP3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 TRAV26-2A0A0B4J265 109 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 C3orf85A0A1B0GTC6 90 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 A0A1B0GWB2 263 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 hDV102S1A0JD36 115 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 RBFOX3A6NFN3 312 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 B4DEV8 164 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 GEMIN2O14893 280 aaKnown RBP3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 TIMM23O14925 209 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNHIT1O43257 154 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 ANGPTL7O43827 346 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 OR9G9P0C7N8 305 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 CT45A10P0DMU9 189 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 PRTN3P24158 256 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 CXCL12P48061 93 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 RND2P52198 227 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 HERV-K104P61576 105 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 RPS23P62266 143 aaKnown RBP3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 TMEM267Q0VDI3 215 aaPredicted RBP3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 SRSF9Q13242 221 aaKnown RBP eCLIP3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 P2RY6Q15077 328 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 MSMO1Q15800 293 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 PYY3Q5JQD4 70 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF506Q5JVG8 444 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 FAM120AOSQ5T036 256 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 IBA57Q5T440 356 aaKnown RBP3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 C10orf25Q5T742 122 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 LYRM7Q5U5X0 104 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF324BQ6AW86 544 aaPredicted RBP3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
PRPF38B-205ENST00000485810 HEPN1Q6WQI6 88 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms