RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 GINS3Q9BRX5 216 aa9.4□□□□□ -0.9
SHROOM3-205ENST00000481002 C20orf24Q9BUV8 137 aa9.4□□□□□ -0.9
SHROOM3-205ENST00000481002 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
SHROOM3-205ENST00000481002 TNFSF18Q9UNG2 199 aa9.4□□□□□ -0.9
SHROOM3-205ENST00000481002 WDR83OSQ9Y284 106 aa9.4□□□□□ -0.9
SHROOM3-205ENST00000481002 IGHV3OR16-8A0A075B7F1 116 aa9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 FXYD6-FXYD2A0A087WZ82 144 aa9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 SMLR1H3BR10 107 aa9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 SAP30O75446 220 aa9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 CFDP00746 253 aaPredicted RBP9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 FOLR2P14207 255 aa9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 NUP62P37198 522 aaPredicted RBP9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 SELENOTP62341 195 aa9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 SAMD5Q5TGI4 173 aa9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 TMEM182Q6ZP80 229 aaPredicted RBP9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 CYP2G1PQ6ZSU1 146 aa9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 TCTE3Q8IZS6 198 aa9.39□□□□□ -0.91
SHROOM3-205ENST00000481002 RNF222A6NCQ9 220 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 HMSDA8MTL9 139 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 G3V4G9 280 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 AGPAT2O15120 278 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 MPDU1O75352 247 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 IGLV1-51P01701 117 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 IL4P05112 153 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 EDN2P20800 178 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 CRYBB3P26998 211 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 OR2F1Q13607 317 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 CLINT1Q14677 625 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 BTNL8Q6UX41 500 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 INO80EQ8NBZ0 244 aaPredicted RBP9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 BPIFCQ8NFQ6 507 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 OR11H4Q8NGC9 324 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 MGST2Q99735 147 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 ATP5SQ99766 215 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 TECRQ9NZ01 308 aaKnown RBP9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 SMPXQ9UHP9 88 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 SLC45A2Q9UMX9 530 aa9.38□□□□□ -0.91
SHROOM3-205ENST00000481002 IGHV7-4-1A0A0J9YVY3 117 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 UBE2L5PA0A1B0GUS4 154 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 ZNF207O43670 478 aaKnown RBP9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 DFFBO76075 338 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 NPPCP23582 126 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 GATA2P23769 480 aaPredicted RBP9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 PLP1P60201 277 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 RAB31Q13636 194 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 USF2Q15853 346 aaPredicted RBP9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 DEFB114Q30KQ6 69 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 AKAP14Q86UN6 197 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 METTL26Q96S19 204 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 GGTLC1Q9BX51 225 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 WFDC1Q9HC57 220 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 U3KQE9 123 aa9.37□□□□□ -0.91
SHROOM3-205ENST00000481002 CHEK1O14757 476 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 LINC00869P0C866 280 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 FGF7P21781 194 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 RPL29P47914 159 aaKnown RBP9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 CAMLGP49069 296 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 EGFEM1PQ0D2K5 195 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 OR2K2Q8NGT1 345 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 NEURL2Q9BR09 285 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 RHPN1-AS1Q9BWJ2 59 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 PARD6GQ9BYG4 376 aaPredicted RBP9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 SMIM3Q9BZL3 60 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 WDR61Q9GZS3 305 aaKnown RBP9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 MFFQ9GZY8 342 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 FBXL17Q9UF56 701 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 MLXQ9UH92 298 aa9.36□□□□□ -0.91
SHROOM3-205ENST00000481002 A0A1W2PS18 150 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 ARPC5O15511 151 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 IFNA5P01569 189 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 APOHP02749 345 aaPredicted RBP9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 HNRNPCP07910 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 EIF2B2P49770 351 aaKnown RBP9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 LYZP61626 148 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 PRR20EP86478 221 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 PRR20CP86479 221 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 PRR20DP86480 221 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 PRR20BP86481 221 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 PRR20AP86496 221 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 OPCMLQ14982 345 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 KPRPQ5T749 579 aaPredicted RBP9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 PXDC1Q5TGL8 231 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 DYNLRB2Q8TF09 96 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 PBDC1Q9BVG4 233 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 RABAC1Q9UI14 185 aa9.35□□□□□ -0.91
SHROOM3-205ENST00000481002 IGHV3-49A0A0A0MS15 119 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 TRAV25A0A0B4J276 109 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 C1QBP02746 253 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 BMI1P35226 326 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 AP2S1P53680 142 aaPredicted RBP9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 ZNF345Q14585 488 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 BEAN1Q3B7T3 259 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 CD300EQ496F6 205 aaPredicted RBP9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 MIC13Q5XKP0 118 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 KCNRGQ8N5I3 272 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 STPG3Q8N7X2 389 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 ST8SIA2Q92186 375 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 NARS2Q96I59 477 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms