RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 GAMTQ14353 236 aa10.88□□□□□ -0.67
LIMS4-202ENST00000480598 BAK1Q16611 211 aa10.88□□□□□ -0.67
LIMS4-202ENST00000480598 CEMP1Q6PRD7 247 aaPredicted RBP10.88□□□□□ -0.67
LIMS4-202ENST00000480598 TRPT1Q86TN4 253 aaKnown RBP10.88□□□□□ -0.67
LIMS4-202ENST00000480598 SLC35E1Q96K37 410 aa10.88□□□□□ -0.67
LIMS4-202ENST00000480598 MAGT1Q9H0U3 335 aa10.88□□□□□ -0.67
LIMS4-202ENST00000480598 PAIP2BQ9ULR5 123 aaKnown RBP10.88□□□□□ -0.67
LIMS4-202ENST00000480598 EPPK1P58107 5090 aaKnown RBP10.88□□□□□ -0.67
LIMS4-202ENST00000480598 ZFP92A6NM28 416 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 DEFB4AO15263 64 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 BUB3O43684 328 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 SLC25A6P12236 298 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 C4BPBP20851 252 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 GPX4P36969 197 aaPredicted RBP10.87□□□□□ -0.67
LIMS4-202ENST00000480598 ATP5IP56385 69 aaPredicted RBP10.87□□□□□ -0.67
LIMS4-202ENST00000480598 PSMG4Q5JS54 123 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 ACTL10Q5JWF8 245 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 LINC00476Q8WZB0 136 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 RNF125Q96EQ8 232 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 PBDC1Q9BVG4 233 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 TMED3Q9Y3Q3 217 aa10.87□□□□□ -0.67
LIMS4-202ENST00000480598 LINC00854A0A1B0GVQ3 168 aa10.86□□□□□ -0.67
LIMS4-202ENST00000480598 FAM90A26D6RGX4 464 aa10.86□□□□□ -0.67
LIMS4-202ENST00000480598 AP2S1P53680 142 aaPredicted RBP10.86□□□□□ -0.67
LIMS4-202ENST00000480598 GGNBP1Q5YKI7 109 aa10.86□□□□□ -0.67
LIMS4-202ENST00000480598 TRIQKQ629K1 86 aa10.86□□□□□ -0.67
LIMS4-202ENST00000480598 SIGLEC15Q6ZMC9 328 aa10.86□□□□□ -0.67
LIMS4-202ENST00000480598 FLVCR2Q9UPI3 526 aa10.86□□□□□ -0.67
LIMS4-202ENST00000480598 WRBO00258 174 aa10.85□□□□□ -0.67
LIMS4-202ENST00000480598 MED6O75586 246 aa10.85□□□□□ -0.67
LIMS4-202ENST00000480598 INPP1P49441 399 aa10.85□□□□□ -0.67
LIMS4-202ENST00000480598 NANOS2P60321 138 aaKnown RBP10.85□□□□□ -0.67
LIMS4-202ENST00000480598 LYZP61626 148 aa10.85□□□□□ -0.67
LIMS4-202ENST00000480598 RAB11AP62491 216 aa10.85□□□□□ -0.67
LIMS4-202ENST00000480598 OR2F1Q13607 317 aa10.85□□□□□ -0.67
LIMS4-202ENST00000480598 PHLDA1Q8WV24 401 aaPredicted RBP10.85□□□□□ -0.67
LIMS4-202ENST00000480598 RAB40CQ96S21 281 aa10.85□□□□□ -0.67
LIMS4-202ENST00000480598 SDHCQ99643 169 aaPredicted RBP10.85□□□□□ -0.67
LIMS4-202ENST00000480598 C11orf68Q9H3H3 251 aaKnown RBP10.85□□□□□ -0.67
LIMS4-202ENST00000480598 NRN1Q9NPD7 142 aa10.85□□□□□ -0.67
LIMS4-202ENST00000480598 IGKV1OR2-108A0A075B7D4 117 aa10.84□□□□□ -0.67
LIMS4-202ENST00000480598 C9orf170A2RU37 121 aa10.84□□□□□ -0.67
LIMS4-202ENST00000480598 SYNGR2O43760 224 aa10.84□□□□□ -0.67
LIMS4-202ENST00000480598 ADAP1O75689 374 aa10.84□□□□□ -0.67
LIMS4-202ENST00000480598 NDUFB6O95139 128 aa10.84□□□□□ -0.67
LIMS4-202ENST00000480598 LY6G6CO95867 125 aa10.84□□□□□ -0.67
LIMS4-202ENST00000480598 SPP1P10451 314 aa10.84□□□□□ -0.67
LIMS4-202ENST00000480598 MORN3Q6PF18 240 aaPredicted RBP10.84□□□□□ -0.67
LIMS4-202ENST00000480598 GSG1LQ6UXU4 331 aa10.84□□□□□ -0.67
LIMS4-202ENST00000480598 CLEC5AQ9NY25 188 aa10.84□□□□□ -0.67
LIMS4-202ENST00000480598 FBXL17Q9UF56 701 aa10.84□□□□□ -0.67
LIMS4-202ENST00000480598 KLK5Q9Y337 293 aaPredicted RBP10.84□□□□□ -0.67
LIMS4-202ENST00000480598 NAP1L6A6NFF2 107 aa10.83□□□□□ -0.68
LIMS4-202ENST00000480598 H3BP45 60 aa10.83□□□□□ -0.68
LIMS4-202ENST00000480598 UBE2MP61081 183 aaKnown RBP10.83□□□□□ -0.68
LIMS4-202ENST00000480598 SPANXN5Q5MJ07 72 aa10.83□□□□□ -0.68
LIMS4-202ENST00000480598 OR8G2PQ6IF36 304 aa10.83□□□□□ -0.68
LIMS4-202ENST00000480598 Q8NAQ8 132 aa10.83□□□□□ -0.68
LIMS4-202ENST00000480598 C11orf45Q8TAV5 145 aa10.83□□□□□ -0.68
LIMS4-202ENST00000480598 CIB3Q96Q77 187 aaPredicted RBP10.83□□□□□ -0.68
LIMS4-202ENST00000480598 TRGV9Q99603 122 aa10.83□□□□□ -0.68
LIMS4-202ENST00000480598 SNRPGP15A8MWD9 76 aa10.82□□□□□ -0.68
LIMS4-202ENST00000480598 PRSS46E5RG02 174 aa10.82□□□□□ -0.68
LIMS4-202ENST00000480598 ANXA7P20073 488 aaKnown RBP10.82□□□□□ -0.68
LIMS4-202ENST00000480598 BTCP35070 178 aa10.82□□□□□ -0.68
LIMS4-202ENST00000480598 NUP62P37198 522 aaPredicted RBP10.82□□□□□ -0.68
LIMS4-202ENST00000480598 DEFB1P60022 68 aa10.82□□□□□ -0.68
LIMS4-202ENST00000480598 SNRPD3P62318 126 aaKnown RBP10.82□□□□□ -0.68
LIMS4-202ENST00000480598 THAP8Q8NA92 274 aa10.82□□□□□ -0.68
LIMS4-202ENST00000480598 WDR12Q9GZL7 423 aaKnown RBP10.82□□□□□ -0.68
LIMS4-202ENST00000480598 IGHV4-28A0A0C4DH34 117 aa10.81□□□□□ -0.68
LIMS4-202ENST00000480598 FABP1P07148 127 aa10.81□□□□□ -0.68
LIMS4-202ENST00000480598 OR4E1P0C645 316 aa10.81□□□□□ -0.68
LIMS4-202ENST00000480598 RBMY1A1P0DJD3 496 aaKnown RBP10.81□□□□□ -0.68
LIMS4-202ENST00000480598 RBMY1CP0DJD4 496 aa10.81□□□□□ -0.68
LIMS4-202ENST00000480598 POLR2GP62487 172 aaKnown RBP eCLIP10.81□□□□□ -0.68
LIMS4-202ENST00000480598 RPP30P78346 268 aaKnown RBP10.81□□□□□ -0.68
LIMS4-202ENST00000480598 RBMY1FQ15415 496 aaKnown RBP10.81□□□□□ -0.68
LIMS4-202ENST00000480598 TMEM41BQ5BJD5 291 aa10.81□□□□□ -0.68
LIMS4-202ENST00000480598 COQ8AQ8NI60 647 aa10.81□□□□□ -0.68
LIMS4-202ENST00000480598 PPP1R14BQ96C90 147 aa10.81□□□□□ -0.68
LIMS4-202ENST00000480598 MFFQ9GZY8 342 aa10.81□□□□□ -0.68
LIMS4-202ENST00000480598 SEPSECSQ9HD40 501 aaKnown RBP10.81□□□□□ -0.68
LIMS4-202ENST00000480598 PFDN2Q9UHV9 154 aa10.81□□□□□ -0.68
LIMS4-202ENST00000480598 X6R8D5 127 aa10.81□□□□□ -0.68
LIMS4-202ENST00000480598 KMT2AQ03164 3969 aa10.8□□□□□ -0.68
LIMS4-202ENST00000480598 ZNF705EA8MWA4 302 aaPredicted RBP10.8□□□□□ -0.68
LIMS4-202ENST00000480598 H3BMM0 161 aa10.8□□□□□ -0.68
LIMS4-202ENST00000480598 IL7P13232 177 aa10.8□□□□□ -0.68
LIMS4-202ENST00000480598 GATA2P23769 480 aaPredicted RBP10.8□□□□□ -0.68
LIMS4-202ENST00000480598 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
LIMS4-202ENST00000480598 TMEM182Q6ZP80 229 aaPredicted RBP10.8□□□□□ -0.68
LIMS4-202ENST00000480598 ACOT7LQ6ZUV0 252 aa10.8□□□□□ -0.68
LIMS4-202ENST00000480598 CSNK1G2-AS1Q8NCQ2 148 aa10.8□□□□□ -0.68
LIMS4-202ENST00000480598 STRAPQ9Y3F4 350 aaKnown RBP10.8□□□□□ -0.68
LIMS4-202ENST00000480598 SOCS3O14543 225 aa10.79□□□□□ -0.68
LIMS4-202ENST00000480598 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
LIMS4-202ENST00000480598 NKX2-1P43699 371 aaPredicted RBP10.79□□□□□ -0.68
LIMS4-202ENST00000480598 ID3Q02535 119 aa10.79□□□□□ -0.68
LIMS4-202ENST00000480598 AKR1C1Q04828 323 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms