RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 OR4S2Q8NH73 311 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 Q8WTZ3 238 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 DCUN1D4Q92564 292 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 ISOC2Q96AB3 205 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 FLYWCH2Q96CP2 140 aaKnown RBP4.92□□□□□ -1.62
SF3B1-209ENST00000479532 RBMXL1Q96E39 390 aaKnown RBP4.92□□□□□ -1.62
SF3B1-209ENST00000479532 TVP23CQ96ET8 276 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 DUX5Q96PT3 197 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 RNF5Q99942 180 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 RASL11BQ9BPW5 248 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 GINS3Q9BRX5 216 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 NIPSNAP3BQ9BS92 247 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 ATG101Q9BSB4 218 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 SLC25A33Q9BSK2 321 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 ALKBH7Q9BT30 221 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-209ENST00000479532 ELOVL1Q9BW60 279 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 NPFFR1Q9GZQ6 430 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 CCL28Q9NRJ3 127 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 MRPL27Q9P0M9 148 aaKnown RBP4.92□□□□□ -1.62
SF3B1-209ENST00000479532 RPH3ALQ9UNE2 315 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 SONP18583 2426 aaKnown RBP4.91□□□□□ -1.62
SF3B1-209ENST00000479532 PIGBOS1A0A0B4J2F0 54 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 A0A1B0GV72 72 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 C9JQL5 133 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 TNFSF12O43508 249 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 RAMP3O60896 148 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 FCGR3BO75015 233 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 HRASP01112 189 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 CTSDP07339 412 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-209ENST00000479532 CT45A6P0DMU7 189 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 CT45A5P0DMU8 189 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 CT45A7P0DMV0 189 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 ESDP10768 282 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 CD24P25063 80 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 TAGLN2P37802 199 aaKnown RBP4.91□□□□□ -1.62
SF3B1-209ENST00000479532 LGALS7P47929 136 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 RND3P61587 244 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 RAB11AP62491 216 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 PAFAH1B2P68402 229 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 FOXI1Q12951 378 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 IL15RAQ13261 267 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 EBI3Q14213 229 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 MMDQ15546 238 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 VMA21Q3ZAQ7 101 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 PHLDA2Q53GA4 152 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 FAAP20Q6NZ36 180 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 CENPVQ7Z7K6 275 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-209ENST00000479532 LHFPL1Q86WI0 220 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 OR4B1Q8NGF8 309 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 OR4F5Q8NH21 305 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 OR51H1Q8NH63 302 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 OSR1Q8TAX0 266 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-209ENST00000479532 MARCH1Q8TCQ1 289 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 CASTOR1Q8WTX7 329 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 TMEM170AQ8WVE7 144 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 TMEM158Q8WZ71 300 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 RPUSD4Q96CM3 377 aaKnown RBP4.91□□□□□ -1.62
SF3B1-209ENST00000479532 HARBI1Q96MB7 349 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 TP53RKQ96S44 253 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 RNF126Q9BV68 326 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 PRSS22Q9GZN4 317 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 TMEM231Q9H6L2 316 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 ESM1Q9NQ30 184 aa4.91□□□□□ -1.62
SF3B1-209ENST00000479532 FN1P02751 2386 aaKnown RBP4.9□□□□□ -1.62
SF3B1-209ENST00000479532 TRAV1-1A0A0B4J248 108 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 A0A1B0GUS0 222 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 XKRY2A2RUG3 117 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 NBR2O15453 112 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 RBFOX2O43251 390 aaKnown RBP eCLIP4.9□□□□□ -1.63
SF3B1-209ENST00000479532 PGLYRP1O75594 196 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-209ENST00000479532 HBE1P02100 147 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 TRGC2P03986 189 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF735P0CB33 412 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 P2RY1P47900 373 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 PIGPP57054 158 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 ERVK-16P61578 105 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF506Q5JVG8 444 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-209ENST00000479532 TBC1D26Q86UD7 250 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 SGPP2Q8IWX5 399 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 GBGT1Q8N5D6 347 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 OR2T6Q8NHC8 308 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 VSTM2AQ8TAG5 236 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 PIFOQ8TCI5 191 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 FRZBQ92765 325 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 C2orf50Q96LR7 162 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 RNF2Q99496 336 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 P2RX4Q99571 388 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 FKBP11Q9NYL4 201 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 GSKIPQ9P0R6 139 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 NAGKQ9UJ70 344 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 MRPS16Q9Y3D3 137 aaKnown RBP4.9□□□□□ -1.63
SF3B1-209ENST00000479532 COX11Q9Y6N1 276 aa4.9□□□□□ -1.63
SF3B1-209ENST00000479532 NSD1Q96L73 2696 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-209ENST00000479532 C3orf85A0A1B0GTC6 90 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 A0A1B0GU03 582 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 KRTAP29-1A8MX34 341 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-209ENST00000479532 H0Y980 276 aa4.89□□□□□ -1.63
SF3B1-209ENST00000479532 H3BQ15 152 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms