RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ATP5SQ99766 215 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 SIGLEC8Q9NYZ4 499 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 FBXL17Q9UF56 701 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 UFC1Q9Y3C8 167 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 WI2-2373I1.2A0A1W2PRP0 233 aa15.14■□□□□ 0.01
ACTB-210ENST00000477812 HMSDA8MTL9 139 aa15.14■□□□□ 0.01
ACTB-210ENST00000477812 ARPC5O15511 151 aa15.14■□□□□ 0.01
ACTB-210ENST00000477812 WIPF1O43516 503 aa15.14■□□□□ 0.01
ACTB-210ENST00000477812 FABP1P07148 127 aa15.14■□□□□ 0.01
ACTB-210ENST00000477812 USF2Q15853 346 aaPredicted RBP15.14■□□□□ 0.01
ACTB-210ENST00000477812 INO80EQ8NBZ0 244 aaPredicted RBP15.14■□□□□ 0.01
ACTB-210ENST00000477812 MCRIP2Q9BUT9 160 aaKnown RBP15.14■□□□□ 0.01
ACTB-210ENST00000477812 C20orf24Q9BUV8 137 aa15.14■□□□□ 0.01
ACTB-210ENST00000477812 SMIM3Q9BZL3 60 aa15.14■□□□□ 0.01
ACTB-210ENST00000477812 SLC45A2Q9UMX9 530 aa15.14■□□□□ 0.01
ACTB-210ENST00000477812 AGPAT2O15120 278 aa15.13■□□□□ 0.01
ACTB-210ENST00000477812 ZNF207O43670 478 aaKnown RBP15.13■□□□□ 0.01
ACTB-210ENST00000477812 FOLR2P14207 255 aa15.13■□□□□ 0.01
ACTB-210ENST00000477812 GATA2P23769 480 aaPredicted RBP15.13■□□□□ 0.01
ACTB-210ENST00000477812 OR2F1Q13607 317 aa15.13■□□□□ 0.01
ACTB-210ENST00000477812 BTNL8Q6UX41 500 aa15.13■□□□□ 0.01
ACTB-210ENST00000477812 OR51G1Q8NGK1 321 aa15.13■□□□□ 0.01
ACTB-210ENST00000477812 NEURL2Q9BR09 285 aa15.13■□□□□ 0.01
ACTB-210ENST00000477812 GGTLC1Q9BX51 225 aa15.13■□□□□ 0.01
ACTB-210ENST00000477812 DFFBO76075 338 aa15.12■□□□□ 0.01
ACTB-210ENST00000477812 IL4P05112 153 aa15.12■□□□□ 0.01
ACTB-210ENST00000477812 CBLN1P23435 193 aa15.12■□□□□ 0.01
ACTB-210ENST00000477812 NUP62P37198 522 aaPredicted RBP15.12■□□□□ 0.01
ACTB-210ENST00000477812 RNF125Q96EQ8 232 aa15.12■□□□□ 0.01
ACTB-210ENST00000477812 ELOVL1Q9BW60 279 aa15.12■□□□□ 0.01
ACTB-210ENST00000477812 WDR61Q9GZS3 305 aaKnown RBP15.12■□□□□ 0.01
ACTB-210ENST00000477812 MPDU1O75352 247 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 C1QBP02746 253 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 FGF7P21781 194 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 SELENOTP62341 195 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 PRR20EP86478 221 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 PRR20CP86479 221 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 PRR20DP86480 221 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 PRR20BP86481 221 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 PRR20AP86496 221 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 OPCMLQ14982 345 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 C9orf66Q5T8R8 295 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 SAMD5Q5TGI4 173 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 MARC2Q969Z3 335 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 GINS3Q9BRX5 216 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 PARD6GQ9BYG4 376 aaPredicted RBP15.11■□□□□ 0.01
ACTB-210ENST00000477812 U3KQE9 123 aa15.11■□□□□ 0.01
ACTB-210ENST00000477812 NBEAL1Q6ZS30 2694 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 IGHV7-4-1A0A0J9YVY3 117 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 SAP30O75446 220 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 CFDP00746 253 aaPredicted RBP15.1■□□□□ 0.01
ACTB-210ENST00000477812 LINC00869P0C866 280 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 CRYBB3P26998 211 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 CAMLGP49069 296 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 INSL3P51460 131 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 ZNF345Q14585 488 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 OXLD1Q5BKU9 147 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 BPIFCQ8NFQ6 507 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 NPCDR1Q9BY65 106 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 MFFQ9GZY8 342 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 MRPL27Q9P0M9 148 aaKnown RBP15.1■□□□□ 0.01
ACTB-210ENST00000477812 SMPXQ9UHP9 88 aa15.1■□□□□ 0.01
ACTB-210ENST00000477812 IGLV1-51P01701 117 aa15.09■□□□□ 0.01
ACTB-210ENST00000477812 APOHP02749 345 aaPredicted RBP15.09■□□□□ 0.01
ACTB-210ENST00000477812 CXCL2P19875 107 aa15.09■□□□□ 0.01
ACTB-210ENST00000477812 AP2S1P53680 142 aaPredicted RBP15.09■□□□□ 0.01
ACTB-210ENST00000477812 PLP1P60201 277 aa15.09■□□□□ 0.01
ACTB-210ENST00000477812 KCNRGQ8N5I3 272 aa15.09■□□□□ 0.01
ACTB-210ENST00000477812 STPG3Q8N7X2 389 aa15.09■□□□□ 0.01
ACTB-210ENST00000477812 MLXQ9UH92 298 aa15.09■□□□□ 0.01
ACTB-210ENST00000477812 NOTCH1P46531 2555 aa15.09■□□□□ 0.01
ACTB-210ENST00000477812 G3V4G9 280 aa15.08■□□□□ 0
ACTB-210ENST00000477812 RPL29P47914 159 aaKnown RBP15.08■□□□□ 0
ACTB-210ENST00000477812 LYZP61626 148 aa15.08■□□□□ 0
ACTB-210ENST00000477812 RAB31Q13636 194 aa15.08■□□□□ 0
ACTB-210ENST00000477812 METTL26Q96S19 204 aa15.08■□□□□ 0
ACTB-210ENST00000477812 VSIRQ9H7M9 311 aa15.08■□□□□ 0
ACTB-210ENST00000477812 IGHV3-49A0A0A0MS15 119 aa15.07■□□□□ 0
ACTB-210ENST00000477812 CHEK1O14757 476 aa15.07■□□□□ 0
ACTB-210ENST00000477812 NPPCP23582 126 aa15.07■□□□□ 0
ACTB-210ENST00000477812 DEFB114Q30KQ6 69 aa15.07■□□□□ 0
ACTB-210ENST00000477812 MIC13Q5XKP0 118 aa15.07■□□□□ 0
ACTB-210ENST00000477812 PBDC1Q9BVG4 233 aa15.07■□□□□ 0
ACTB-210ENST00000477812 GPR61Q9BZJ8 451 aa15.07■□□□□ 0
ACTB-210ENST00000477812 IFNA5P01569 189 aa15.06■□□□□ 0
ACTB-210ENST00000477812 HNRNPCP07910 306 aaKnown RBP eCLIP15.06■□□□□ 0
ACTB-210ENST00000477812 EIF2B2P49770 351 aaKnown RBP15.06■□□□□ 0
ACTB-210ENST00000477812 ZNF266Q14584 549 aa15.06■□□□□ 0
ACTB-210ENST00000477812 ST8SIA2Q92186 375 aa15.06■□□□□ 0
ACTB-210ENST00000477812 RHPN1-AS1Q9BWJ2 59 aa15.06■□□□□ 0
ACTB-210ENST00000477812 CYTL1Q9NRR1 136 aa15.06■□□□□ 0
ACTB-210ENST00000477812 SLC39A9Q9NUM3 307 aa15.06■□□□□ 0
ACTB-210ENST00000477812 TECRQ9NZ01 308 aaKnown RBP15.06■□□□□ 0
ACTB-210ENST00000477812 RABAC1Q9UI14 185 aa15.06■□□□□ 0
ACTB-210ENST00000477812 PXMP4Q9Y6I8 212 aa15.06■□□□□ 0
ACTB-210ENST00000477812 IGHV3OR16-13A0A075B7E8 117 aa15.05■□□□□ -0
ACTB-210ENST00000477812 IGHV3-74A0A0B4J1X5 117 aa15.05■□□□□ -0
ACTB-210ENST00000477812 EGFEM1PQ0D2K5 195 aa15.05■□□□□ -0
ACTB-210ENST00000477812 KPRPQ5T749 579 aaPredicted RBP15.05■□□□□ -0
ACTB-210ENST00000477812 RPL7L1Q6DKI1 246 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms