RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SMDT1Q9H4I9 107 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 SEPSECSQ9HD40 501 aaKnown RBP10.72□□□□□ -0.69
TRAF4-210ENST00000475329 MANBALQ9NQG1 85 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 GAR1Q9NY12 217 aaKnown RBP10.72□□□□□ -0.69
TRAF4-210ENST00000475329 TECRQ9NZ01 308 aaKnown RBP10.72□□□□□ -0.69
TRAF4-210ENST00000475329 TRBV7-1A0A0A6YYK4 115 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 TMEM218A2RU14 115 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 HYPMO75409 117 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 IGHV3-23P01764 117 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 RD3LP0DJH9 198 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 PSG1P11464 419 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 ORM2P19652 201 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 PPIFP30405 207 aaKnown RBP10.71□□□□□ -0.69
TRAF4-210ENST00000475329 TAGLN2P37802 199 aaKnown RBP10.71□□□□□ -0.69
TRAF4-210ENST00000475329 TPPP2P59282 170 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 ATP5G2Q06055 141 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 ICAM4Q14773 271 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 KHDC3LQ587J8 217 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 OR1B1Q8NGR6 318 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 TMEM37Q8WXS4 190 aa10.71□□□□□ -0.69
TRAF4-210ENST00000475329 OR2T8A6NH00 312 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 DNAJC9-AS1A6NH13 148 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 SFTA3P0C7M3 94 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 C8orf88P0DMB2 117 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 GCHFRP30047 84 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 LYZP61626 148 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 CFHR3Q02985 330 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 PATE2Q6UY27 113 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 OR51G1Q8NGK1 321 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 ATP6V0BQ99437 205 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 RARRES2Q99969 163 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 TMPRSS5Q9H3S3 457 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 ZNF702PQ9H963 129 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 VAX2Q9UIW0 290 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 HIGD1AQ9Y241 93 aa10.7□□□□□ -0.7
TRAF4-210ENST00000475329 C9JQL5 133 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 NUPL2O15504 423 aaKnown RBP10.69□□□□□ -0.7
TRAF4-210ENST00000475329 LY6G6DO95868 133 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 IGLV1-40P01703 118 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 HSPB1P04792 205 aaKnown RBP10.69□□□□□ -0.7
TRAF4-210ENST00000475329 PF4V1P10720 104 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 GPR183P32249 361 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 RIPPLY3P57055 190 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 PQLC2Q6ZP29 291 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 LINC00305Q7Z4B0 112 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 RXFP4Q8TDU9 374 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 Q8WTZ3 238 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 USMG5Q96IX5 58 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 CCDC140Q96MF4 163 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 DUX5Q96PT3 197 aa10.69□□□□□ -0.7
TRAF4-210ENST00000475329 TMEM89A2RUT3 159 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 F8W036 122 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 OR7C2O60412 319 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 OR2C1O95371 312 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 CTSGP08311 255 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 SRD5A1P18405 259 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 RNF125Q96EQ8 232 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 UHRF2Q96PU4 802 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 SMR3AQ99954 134 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 SLC25A2Q9BXI2 301 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 SLC35B3Q9H1N7 401 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 TMEM167BQ9NRX6 74 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 TLN2Q9Y4G6 2542 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 AKAP9Q99996 3911 aa10.68□□□□□ -0.7
TRAF4-210ENST00000475329 WI2-2373I1.2A0A1W2PRP0 233 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 TGOLN2O43493 480 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 IGHG4P01861 327 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 IL4P05112 153 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 ADCYAP1P18509 176 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 SLC35B1P78383 322 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 MEF2BQ02080 365 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-210ENST00000475329 MORN5Q5VZ52 161 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 CLEC19AQ6UXS0 136 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 ZNF600Q6ZNG1 722 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 S100A7AQ86SG5 101 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 Q8N2B8 174 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 ZNF491Q8N8L2 437 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 OR5AU1Q8NGC0 362 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 FAM167A-AS1Q96KT0 104 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 CHRDL1Q9BU40 450 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 SEC11CQ9BY50 192 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 CDC42EP3Q9UKI2 254 aa10.67□□□□□ -0.7
TRAF4-210ENST00000475329 TRAV5A0A0B4J249 113 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 A0A0G2JLM5 398 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 PAGE4O60829 102 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 NDUFS6O75380 124 aaKnown RBP10.66□□□□□ -0.7
TRAF4-210ENST00000475329 CLEC3BP05452 202 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 SRP19P09132 144 aaKnown RBP10.66□□□□□ -0.7
TRAF4-210ENST00000475329 FOSL1P15407 271 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 ADMP35318 185 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 C10orf91Q5T1B1 145 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 STXBP6Q8NFX7 210 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 ZNF503Q96F45 646 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 GNB4Q9HAV0 340 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 MRPL27Q9P0M9 148 aaKnown RBP10.66□□□□□ -0.7
TRAF4-210ENST00000475329 CARHSP1Q9Y2V2 147 aaKnown RBP10.66□□□□□ -0.7
TRAF4-210ENST00000475329 ARL2-SNX15V9GYD0 113 aa10.66□□□□□ -0.7
TRAF4-210ENST00000475329 CSMD1Q96PZ7 3565 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 ACANP16112 2415 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms