RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 ST6GALNAC3Q8NDV1 305 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF555Q8NEP9 628 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SLC30A7Q8NEW0 376 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR2M3Q8NG83 312 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR11G2Q8NGC1 345 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR52R1Q8NGF1 315 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR8J3Q8NGG0 315 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR51T1Q8NGJ9 327 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR5D14Q8NGL3 314 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR4C16Q8NGL9 310 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR10D4PQ8NGN7 298 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR5C1Q8NGR4 320 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR2T35Q8NGX2 323 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR10J5Q8NHC4 309 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 STAG3L4Q8TBR4 150 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 MYOZ3Q8TDC0 251 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LMX1AQ8TE12 382 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 BRK1Q8WUW1 75 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 THEM6Q8WUY1 208 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 NAT14Q8WUY8 206 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 PPP1R1CQ8WVI7 109 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 H1FXQ92522 213 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SPTSSAQ969W0 71 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 MUCL1Q96DR8 90 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ADAT3Q96EY9 351 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TEX37Q96LM6 180 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CIB3Q96Q77 187 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C2orf88Q9BSF0 95 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 PRADC1Q9BSG0 188 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 DERL1Q9BUN8 251 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CHAC1Q9BUX1 264 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR8D2Q9GZM6 311 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TMEM191AQ9H0A3 160 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LPAR5Q9H1C0 372 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RNASE7Q9H1E1 156 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SLC35B3Q9H1N7 401 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TMEM133Q9H2Q1 129 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SMDT1Q9H4I9 107 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RPP21Q9H633 154 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 NAA60Q9H7X0 242 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 PLEKHF2Q9H8W4 249 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 WFDC1Q9HC57 220 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C14orf132Q9NPU4 83 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LHX9Q9NQ69 397 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 NDUFB11Q9NX14 153 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF586Q9NXT0 402 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TAS2R8Q9NYW2 309 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TAS2R4Q9NYW5 299 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OR5AC2Q9NZP5 309 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RBM12B-AS1Q9P1G2 102 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SLC23A2Q9UGH3 650 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 NAT8BQ9UHF3 227 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SMPXQ9UHP9 88 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 BOKQ9UMX3 212 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 HIGD1AQ9Y241 93 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF835Q9Y2P0 537 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 AMMECR1Q9Y4X0 333 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 PHLDA3Q9Y5J5 127 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ADAMTSL3P82987 1691 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 DNMT1P26358 1616 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CAMSAP1Q5T5Y3 1602 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SCN10AQ9Y5Y9 1956 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 BRCA1P38398 1863 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 KMT2EQ8IZD2 1858 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TMEM131Q92545 1883 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 DOCK5Q9H7D0 1870 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 MYO16Q9Y6X6 1858 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 KIF1BO60333 1816 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 MYO5BQ9ULV0 1848 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 KDM6AO15550 1401 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 WRNQ14191 1432 aaPredicted RBP eCLIP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RIC1Q4ADV7 1423 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 SPATA31E1Q6ZUB1 1445 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 SSH2Q76I76 1423 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ADAMTS13Q76LX8 1427 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ERBINQ96RT1 1412 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 NSD3Q9BZ95 1437 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CEP152O94986 1710 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RFX7Q2KHR2 1363 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IBTKQ9P2D0 1353 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 DOCK6Q96HP0 2047 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CAMTA1Q9Y6Y1 1673 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 DSPPQ9NZW4 1301 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 HELZ2Q9BYK8 2649 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IGLV2-18A0A075B6J9 118 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IGLV3-12A0A075B6K2 115 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 A0A087WUU8 490 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TRGV5A0A0B4J1U4 118 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IGHV3-15A0A0B4J1V0 119 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IGHV3-43A0A0B4J1X8 118 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TRAV17A0A0B4J275 112 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IGHV1-24A0A0C4DH33 117 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IGKV2-24A0A0C4DH68 120 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 LOC107984156A0A0G2JMH3 177 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 LOC107984640A0A0U1RRK4 108 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 C3orf85A0A1B0GTC6 90 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 A0A1W2PQD3 144 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 hDV103S1A0JD37 113 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ODAMA1E959 279 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ARRDC5A6NEK1 342 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms