RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 AHSA2Q719I0 299 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 LYPD6Q86Y78 171 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 PGAM4Q8N0Y7 254 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 OR10G2Q8NGC3 310 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 OR2T29Q8NH02 315 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 ZFAND1Q8TCF1 268 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 LEAP2Q969E1 77 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 CEP19Q96LK0 163 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 NABP2Q9BQ15 211 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 YIPF3Q9GZM5 350 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 MTFP1Q9UDX5 166 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 OR52A1Q9UKL2 312 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 SAMHD1Q9Y3Z3 626 aaKnown RBP3.55□□□□□ -1.84
CKS1B-204ENST00000471245 A0A1B0GVX0 72 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 I3L521 148 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 OR2H2O95918 312 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 PSMB8P28062 276 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 ERP29P30040 261 aaKnown RBP3.54□□□□□ -1.84
CKS1B-204ENST00000471245 SYNJ2BPP57105 145 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 UBE2KP61086 200 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 ESRRGP62508 458 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 AESQ08117 197 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 ZNF616Q08AN1 781 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 MADCAM1Q13477 382 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 BSXQ3C1V8 233 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 ORMDL2Q53FV1 153 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 RBM48Q5RL73 367 aaKnown RBP3.54□□□□□ -1.84
CKS1B-204ENST00000471245 Q6P435 159 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 CEMP1Q6PRD7 247 aaPredicted RBP3.54□□□□□ -1.84
CKS1B-204ENST00000471245 SSX7Q7RTT5 188 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 SGPP2Q8IWX5 399 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 DEFB107AQ8IZN7 70 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 Q8N6K4 173 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 TEX47Q8TBZ9 253 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 MYOZ3Q8TDC0 251 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 ITFG2Q969R8 447 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 CMTM5Q96DZ9 223 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 ADAT3Q96EY9 351 aaPredicted RBP3.54□□□□□ -1.84
CKS1B-204ENST00000471245 ADTRPQ96IZ2 230 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 PDCD1LG2Q9BQ51 273 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 ACOT13Q9NPJ3 140 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 SLC7A11Q9UPY5 501 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 R4GMQ9 66 aa3.54□□□□□ -1.84
CKS1B-204ENST00000471245 IGLV4-69A0A075B6H9 119 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 IGHV3-72A0A0B4J1Y9 119 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 ODAMA1E959 279 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 ZNF736B4DX44 427 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-204ENST00000471245 SMLR1H3BR10 107 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 TLX1NBP0CAT3 122 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 HLA-GP17693 338 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 MYL9P24844 172 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 KIR3DL2P43630 455 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 CXCR4P61073 352 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 RUNX1Q01196 453 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 EBI3Q14213 229 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 HES1Q14469 280 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 CDK5R1Q15078 307 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 BCL2L15Q5TBC7 163 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 ZNF322Q6U7Q0 402 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-204ENST00000471245 TRAPPC6BQ86SZ2 158 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 MRPL52Q86TS9 123 aaKnown RBP3.53□□□□□ -1.84
CKS1B-204ENST00000471245 ZNF565Q8N9K5 539 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 Q8N9L7 120 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 OR10AC1Q8NH08 325 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 FAM104AQ969W3 186 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 SPACA5Q96QH8 159 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 C20orf144Q9BQM9 153 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 HSPB9Q9BQS6 159 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 MROQ9BYG7 248 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 CHST5Q9GZS9 411 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 ABCG5Q9H222 651 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 ARV1Q9H2C2 271 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 LINC00574Q9H8X3 128 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 HMG20AQ9NP66 347 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 MED4Q9NPJ6 270 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 TVP23BQ9NYZ1 205 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 PSG11Q9UQ72 335 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 HSPG2P98160 4391 aa3.53□□□□□ -1.84
CKS1B-204ENST00000471245 TRGV10A0A0A0MS01 117 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 OOSP1A8MZH6 123 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 UPK1BO75841 260 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 RPP14O95059 124 aaKnown RBP3.52□□□□□ -1.85
CKS1B-204ENST00000471245 IGKV1D-33P01593 117 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 IGKV1-33P01594 117 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 IGLV1-51P01701 117 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 HMGN1P05114 100 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 CSN2P05814 226 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 NFYBP25208 207 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 SSTR5P35346 364 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 GALR1P47211 349 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 REG1BP48304 166 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 DAPP51397 102 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 LINC00322Q6ZN03 302 aaPredicted RBP3.52□□□□□ -1.85
CKS1B-204ENST00000471245 OR51T1Q8NGJ9 327 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 ASB17Q8WXJ9 295 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 RDH12Q96NR8 316 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 CAMK2N2Q96S95 79 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 TBX5Q99593 518 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 SLIRPQ9GZT3 109 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms