RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 FABP1P07148 127 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 CPMP14384 443 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 MARCKSL1P49006 195 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 CDK9P50750 372 aaKnown RBP2.18□□□□□ -2.06
LSM5-209ENST00000468872 TSPEAR-AS2P59090 65 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 ZNF117Q03924 483 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 PRDX4Q13162 271 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 ACOT6Q3I5F7 207 aaPredicted RBP2.18□□□□□ -2.06
LSM5-209ENST00000468872 TMEM97Q5BJF2 176 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 ACSBG2Q5FVE4 666 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 DHRS4L2Q6PKH6 230 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 GLT6D1Q7Z4J2 308 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 OR11H1Q8NG94 326 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 JOSD2Q8TAC2 188 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 AP3S1Q92572 193 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 C11orf1Q9H5F2 150 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 LSM5Q9Y4Y9 91 aaKnown RBP2.18□□□□□ -2.06
LSM5-209ENST00000468872 PCYT1BQ9Y5K3 369 aaPredicted RBP2.18□□□□□ -2.06
LSM5-209ENST00000468872 TNRC6BQ9UPQ9 1833 aaKnown RBP2.18□□□□□ -2.06
LSM5-209ENST00000468872 MYLKQ15746 1914 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 CHD3Q12873 2000 aaKnown RBP2.18□□□□□ -2.06
LSM5-209ENST00000468872 KMT2AQ03164 3969 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 DIDO1Q9BTC0 2240 aaKnown RBP2.17□□□□□ -2.06
LSM5-209ENST00000468872 TMED7-TICAM2A0A0A6YYA0 188 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 C2orf74A8MZ97 194 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 EEF1E1-BLOC1S5C9J1V9 151 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 INMT-MINDY4F8WBC2 141 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 M0R381 172 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 PGRMC1O00264 195 aaKnown RBP2.17□□□□□ -2.06
LSM5-209ENST00000468872 CIAO1O76071 339 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 LY6HO94772 140 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 OR4E1P0C645 316 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 LPAR6P43657 344 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 TMEM33P57088 247 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 PMAIP1Q13794 54 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 EDDM3AQ14507 147 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 FAM201AQ5SY85 155 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 RASL11AQ6T310 242 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 SBSNQ6UWP8 590 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 SLC51BQ86UW2 128 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 UBL4BQ8N7F7 174 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 OR4X1Q8NH49 305 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 ANKRD36BP1Q96IX9 119 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 TBX5Q99593 518 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 SELENOSQ9BQE4 189 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 DCSTAMPQ9H295 470 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 OR51I2Q9H344 312 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 LRTM1Q9HBL6 345 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 IDI2-AS1Q9NZ38 188 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 STOML2Q9UJZ1 356 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 CCL26Q9Y258 94 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 ARL2BPQ9Y2Y0 163 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 PRELID3BQ9Y3B1 194 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 Q9Y3F1 56 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 ARL5AQ9Y689 179 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 MINOS1-NBL1R4GNA1 71 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 SPEF2Q9C093 1822 aa2.17□□□□□ -2.06
LSM5-209ENST00000468872 MCM3APO60318 1980 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 TRAV8-1A0A0A6YYK1 113 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 OR5K4A6NMS3 321 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 ODF3BA8MYP8 253 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 C19orf84I3L1E1 186 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 BHLHE40O14503 412 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 CD7P09564 240 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 UCHL3P15374 230 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 SLC25A16P16260 332 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 BLVRBP30043 206 aaPredicted RBP2.16□□□□□ -2.06
LSM5-209ENST00000468872 RWDD2BP57060 319 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 HIST2H3PS2Q5TEC6 136 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 FAM78BQ5VT40 261 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 C1orf174Q8IYL3 243 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 OR4K13Q8NH42 304 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 OR10A6Q8NH74 314 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 DIRAS2Q96HU8 199 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 SLC35G5Q96KT7 338 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 PPP1R2P1Q96PQ5 205 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 MGLLQ99685 303 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 HOPXQ9BPY8 73 aaPredicted RBP2.16□□□□□ -2.06
LSM5-209ENST00000468872 PAQR5Q9NXK6 330 aaPredicted RBP2.16□□□□□ -2.06
LSM5-209ENST00000468872 HHLA2Q9UM44 414 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 PKIGQ9Y2B9 76 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 COQ4Q9Y3A0 265 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
LSM5-209ENST00000468872 IGHV3-73A0A0B4J1V6 119 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 A0A0J9YX75 114 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 LCE6AA0A183 80 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 DHRS12A0PJE2 317 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 PQLC2LA1A4F0 135 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 C17orf51A8MQB3 221 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 KLRC4O43908 158 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 OR10J1P30954 320 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 GABRA4P48169 554 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 TNFAIP6P98066 277 aaPredicted RBP2.15□□□□□ -2.07
LSM5-209ENST00000468872 SNCBQ16143 134 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 OR4C16Q8NGL9 310 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 LHFPL5Q8TAF8 219 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 NEK7Q8TDX7 302 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 TMA16Q96EY4 203 aaKnown RBP2.15□□□□□ -2.07
LSM5-209ENST00000468872 TMEM109Q9BVC6 243 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 CMTM6Q9NX76 183 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms