RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 KIR2DS2P43631 304 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 VDAC2P45880 294 aaPredicted RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 RBM11P57052 281 aaKnown RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 HLA-DRB3P79483 266 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 EWSR1Q01844 656 aaKnown RBP eCLIP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 LAMTOR4Q0VGL1 99 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 MPV17LQ2QL34 196 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 SLC25A35Q3KQZ1 300 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 MPV17L2Q567V2 206 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 HRCT1Q6UXD1 115 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 Q6ZS92 163 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 FAM231DQ6ZW35 169 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 C10orf111Q8N326 155 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 CLDN19Q8N6F1 224 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 ZFP62Q8NB50 900 aaPredicted RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 OR4K17Q8NGC6 315 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 OR8S1Q8NH09 359 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 OR10AG1Q8NH19 301 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF502Q8TBZ5 544 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 RTN4IP1Q8WWV3 396 aaPredicted RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 CLDN23Q96B33 292 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 BORCS7Q96B45 105 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 PLEKHB2Q96CS7 222 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 GNPNAT1Q96EK6 184 aaPredicted RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 PMCHL2Q9BQD1 86 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 RNASE7Q9H1E1 156 aaKnown RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 POMKQ9H5K3 350 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 EDA2RQ9HAV5 297 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 HRASLS2Q9NWW9 162 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 TRMT112Q9UI30 125 aaKnown RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 PKIGQ9Y2B9 76 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF257Q9Y2Q1 563 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 SPCS1Q9Y6A9 102 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 NRXN3Q9Y4C0 1643 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 SCN10AQ9Y5Y9 1956 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 A0A0G2JMZ2 1700 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 LRRC37A2A6NM11 1700 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 LRRC37AA6NMS7 1700 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 ANKRD36A6QL64 1941 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 STRCP1A6NGW2 1772 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 NLRC5Q86WI3 1866 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 TRAV5A0A0B4J249 113 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 A0A1W2PPM0 123 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 RBFOX3A6NFN3 312 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 GGTLC3B5MD39 225 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 TMEM262E9PQX1 116 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 C17orf112F2Z3M2 114 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 K7ENP7 123 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 ISLRO14498 428 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 OXTP01178 125 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 HLA-DPB1P04440 258 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 SRP19P09132 144 aaKnown RBP2.44□□□□□ -2.02
VPS13D-203ENST00000466732 TACSTD2P09758 323 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF286BP0CG31 522 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 CPMP14384 443 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 CCR2P41597 374 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 CA7P43166 264 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 SSR4P51571 173 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 RPS14P62263 151 aaKnown RBP2.44□□□□□ -2.02
VPS13D-203ENST00000466732 ATP5G2Q06055 141 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 SLC38A11Q08AI6 406 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 VGLL4Q14135 290 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 DIAPH2-AS1Q14236 149 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 HES1Q14469 280 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 OR7A5Q15622 319 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 MSMO1Q15800 293 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 LINC00303Q3SY05 128 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 VAX1Q5SQQ9 334 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 CMC1Q7Z7K0 106 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 SIGLECL1Q8N7X8 197 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 OR11H6Q8NGC7 330 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 OR5D14Q8NGL3 314 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 OR10J6PQ8NGY7 276 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 C18orf32Q8TCD1 76 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 GEMIN6Q8WXD5 167 aaKnown RBP2.44□□□□□ -2.02
VPS13D-203ENST00000466732 ARPC1AQ92747 370 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 MAL2Q969L2 176 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 AQP10Q96PS8 301 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 TMEM70Q9BUB7 260 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 ULBP3Q9BZM4 244 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 TMEM222Q9H0R3 208 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 VSIRQ9H7M9 311 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 C1orf123Q9NWV4 160 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 ABRACLQ9P1F3 81 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 LY75O60449 1722 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 SIP14410 1827 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 LRRK1Q38SD2 2015 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 NHSQ6T4R5 1651 aa2.44□□□□□ -2.02
VPS13D-203ENST00000466732 TMED7-TICAM2A0A0A6YYA0 188 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 FAM236DA0A1B0GTK5 79 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 TSPAN11A1L157 253 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 C5orf49A4QMS7 147 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 ARRDC5A6NEK1 342 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 DPRXA6NFQ7 191 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 RIIAD1A6NNX1 92 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 SOCS1O15524 211 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 SCRG1O75711 98 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 NDUFC2O95298 119 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 CXorf1O96002 111 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 GYPAP02724 150 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms