RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 RD3LP0DJH9 198 aa13.32□□□□□ -0.28
CPSF4-209ENST00000465132 BPIFCQ8NFQ6 507 aa13.32□□□□□ -0.28
CPSF4-209ENST00000465132 MARC2Q969Z3 335 aa13.32□□□□□ -0.28
CPSF4-209ENST00000465132 HMSDA8MTL9 139 aa13.31□□□□□ -0.28
CPSF4-209ENST00000465132 F8W735 103 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-209ENST00000465132 TOMM40O96008 361 aa13.31□□□□□ -0.28
CPSF4-209ENST00000465132 INSL3P51460 131 aa13.31□□□□□ -0.28
CPSF4-209ENST00000465132 NHLH2Q02577 135 aa13.31□□□□□ -0.28
CPSF4-209ENST00000465132 ZNF266Q14584 549 aa13.31□□□□□ -0.28
CPSF4-209ENST00000465132 VWC2Q2TAL6 325 aa13.31□□□□□ -0.28
CPSF4-209ENST00000465132 ATP5SQ99766 215 aa13.31□□□□□ -0.28
CPSF4-209ENST00000465132 CHRDL1Q9BU40 450 aa13.31□□□□□ -0.28
CPSF4-209ENST00000465132 DAZ1Q9NQZ3 744 aaKnown RBP13.31□□□□□ -0.28
CPSF4-209ENST00000465132 TNFSF18Q9UNG2 199 aa13.31□□□□□ -0.28
CPSF4-209ENST00000465132 RNF24Q9Y225 148 aa13.31□□□□□ -0.28
CPSF4-209ENST00000465132 SEC14L6B5MCN3 397 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 C17orf112F2Z3M2 114 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 K7EMT4 169 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 TAAR5O14804 337 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 ADMP35318 185 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 SLURP1P55000 103 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 SYNJ2BPP57105 145 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 OR2F1Q13607 317 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 TIGITQ495A1 244 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 PXDC1Q5TGL8 231 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 ZNF709Q8N972 641 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 OR51G1Q8NGK1 321 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 OR9G4Q8NGQ1 327 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 SCGB1C1Q8TD33 95 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 TMEM190Q8WZ59 177 aa13.3□□□□□ -0.28
CPSF4-209ENST00000465132 DLX4Q92988 240 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-209ENST00000465132 BORCS7-ASMTA0A0B4J1R7 106 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 A8MWP6 167 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 IGKV1-17P01599 117 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 ARL16Q0P5N6 197 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 ZNF345Q14585 488 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 ST6GAL2Q96JF0 529 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 HYLS1Q96M11 299 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 C20orf24Q9BUV8 137 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 MFFQ9GZY8 342 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 TMEM231Q9H6L2 316 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 MRPL36Q9P0J6 103 aaKnown RBP13.29□□□□□ -0.28
CPSF4-209ENST00000465132 WDR83OSQ9Y284 106 aa13.29□□□□□ -0.28
CPSF4-209ENST00000465132 PUS1Q9Y606 427 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPSF4-209ENST00000465132 A0A0D9SG52 128 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 A0A1W2PS18 150 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 ARPC5O15511 151 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 CD5P06127 495 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 C4BPBP20851 252 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 CLINT1Q14677 625 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 BTNL8Q6UX41 500 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 HAPLN4Q86UW8 402 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 METTL26Q96S19 204 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 ASCL2Q99929 193 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 PARD6GQ9BYG4 376 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-209ENST00000465132 SIGLEC8Q9NYZ4 499 aa13.28□□□□□ -0.28
CPSF4-209ENST00000465132 MRPL27Q9P0M9 148 aaKnown RBP13.28□□□□□ -0.28
CPSF4-209ENST00000465132 UBE2L5PA0A1B0GUS4 154 aa13.27□□□□□ -0.29
CPSF4-209ENST00000465132 C1QBP02746 253 aa13.27□□□□□ -0.29
CPSF4-209ENST00000465132 NPPCP23582 126 aa13.27□□□□□ -0.29
CPSF4-209ENST00000465132 CAMLGP49069 296 aa13.27□□□□□ -0.29
CPSF4-209ENST00000465132 Q5BKY6 102 aa13.27□□□□□ -0.29
CPSF4-209ENST00000465132 Q6ZRG5 221 aa13.27□□□□□ -0.29
CPSF4-209ENST00000465132 CYP2G1PQ6ZSU1 146 aa13.27□□□□□ -0.29
CPSF4-209ENST00000465132 GRAMD2BQ96HH9 432 aa13.27□□□□□ -0.29
CPSF4-209ENST00000465132 SLC45A2Q9UMX9 530 aa13.27□□□□□ -0.29
CPSF4-209ENST00000465132 ZNF256Q9Y2P7 627 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-209ENST00000465132 C3orf84H3BNL1 204 aa13.26□□□□□ -0.29
CPSF4-209ENST00000465132 IL4P05112 153 aa13.26□□□□□ -0.29
CPSF4-209ENST00000465132 PSG1P11464 419 aa13.26□□□□□ -0.29
CPSF4-209ENST00000465132 FGF7P21781 194 aa13.26□□□□□ -0.29
CPSF4-209ENST00000465132 EIF5AP63241 154 aaKnown RBP13.26□□□□□ -0.29
CPSF4-209ENST00000465132 ZFP69Q49AA0 526 aa13.26□□□□□ -0.29
CPSF4-209ENST00000465132 TOMM20LQ6UXN7 152 aa13.26□□□□□ -0.29
CPSF4-209ENST00000465132 RNF125Q96EQ8 232 aa13.26□□□□□ -0.29
CPSF4-209ENST00000465132 TECRQ9NZ01 308 aaKnown RBP13.26□□□□□ -0.29
CPSF4-209ENST00000465132 IGKV1D-37A0A075B6S9 117 aa13.25□□□□□ -0.29
CPSF4-209ENST00000465132 IGHV3-35A0A0C4DH35 117 aa13.25□□□□□ -0.29
CPSF4-209ENST00000465132 A0A1B0GVG6 124 aa13.25□□□□□ -0.29
CPSF4-209ENST00000465132 AGPAT2O15120 278 aa13.25□□□□□ -0.29
CPSF4-209ENST00000465132 PFDN1O60925 122 aa13.25□□□□□ -0.29
CPSF4-209ENST00000465132 SAP30O75446 220 aa13.25□□□□□ -0.29
CPSF4-209ENST00000465132 JTBO76095 146 aa13.25□□□□□ -0.29
CPSF4-209ENST00000465132 EIF2B2P49770 351 aaKnown RBP13.25□□□□□ -0.29
CPSF4-209ENST00000465132 FBXL17Q9UF56 701 aa13.25□□□□□ -0.29
CPSF4-209ENST00000465132 RABAC1Q9UI14 185 aa13.25□□□□□ -0.29
CPSF4-209ENST00000465132 IGKV1OR2-108A0A075B7D4 117 aa13.24□□□□□ -0.29
CPSF4-209ENST00000465132 ELOA3CA0A087WX78 387 aaPredicted RBP13.24□□□□□ -0.29
CPSF4-209ENST00000465132 KANTRA0A1W2PQU2 76 aa13.24□□□□□ -0.29
CPSF4-209ENST00000465132 RPL29P47914 159 aaKnown RBP13.24□□□□□ -0.29
CPSF4-209ENST00000465132 ZNF90Q03938 601 aa13.24□□□□□ -0.29
CPSF4-209ENST00000465132 OR2K2Q8NGT1 345 aa13.24□□□□□ -0.29
CPSF4-209ENST00000465132 DYNLRB2Q8TF09 96 aa13.24□□□□□ -0.29
CPSF4-209ENST00000465132 SMIM3Q9BZL3 60 aa13.24□□□□□ -0.29
CPSF4-209ENST00000465132 WDR61Q9GZS3 305 aaKnown RBP13.24□□□□□ -0.29
CPSF4-209ENST00000465132 C2orf70A6NJV1 201 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 G3V3Q6 166 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 SMLR1H3BR10 107 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
CPSF4-209ENST00000465132 CBLN1P23435 193 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms