RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 HNRNPCP07910 306 aaKnown RBP eCLIP6.57□□□□□ -1.36
LDB1-203ENST00000461873 OR4E1P0C645 316 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 RD3LP0DJH9 198 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 VAMP1P23763 118 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 P2RY1P47900 373 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 RND2P52198 227 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 ATP5IP56385 69 aaPredicted RBP6.57□□□□□ -1.36
LDB1-203ENST00000461873 DHRS2Q13268 280 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 TIGITQ495A1 244 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 C4orf46Q504U0 113 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 TMEM41BQ5BJD5 291 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 LEMD1Q68G75 181 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 OR11H2Q8NH07 326 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 DTD1Q8TEA8 209 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 DEDD2Q8WXF8 326 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 SLC35E1Q96K37 410 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 VSIRQ9H7M9 311 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 SHPKQ9UHJ6 478 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 TMEM56-RWDD3S4R434 201 aa6.57□□□□□ -1.36
LDB1-203ENST00000461873 A0A0G2JRQ6 117 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 IL4P05112 153 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 P0C879 139 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 BCAP31P51572 246 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 YPEL3P61236 119 aaPredicted RBP6.56□□□□□ -1.36
LDB1-203ENST00000461873 PPP1R1AQ13522 171 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 MLANAQ16655 118 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 C4orf48Q5BLP8 95 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 FAM90A2PQ658T7 463 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 MORN3Q6PF18 240 aaPredicted RBP6.56□□□□□ -1.36
LDB1-203ENST00000461873 C11orf45Q8TAV5 145 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 NPIPB3Q92617 1050 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 PBDC1Q9BVG4 233 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 ZFAND3Q9H8U3 227 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 FBXL17Q9UF56 701 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 STARD9Q9P2P6 4700 aa6.56□□□□□ -1.36
LDB1-203ENST00000461873 A0A1B0GU03 582 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 DUXBA0A1W2PPF3 345 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 C9orf170A2RU37 121 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 WRBO00258 174 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 SIX6O95475 246 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 APOHP02749 345 aaPredicted RBP6.55□□□□□ -1.36
LDB1-203ENST00000461873 IL5P05113 134 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 ZNF688P0C7X2 276 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 SPP1P10451 314 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 ATF4P18848 351 aaPredicted RBP6.55□□□□□ -1.36
LDB1-203ENST00000461873 CRYBB3P26998 211 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 ID1P41134 155 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 SMCPP49901 116 aaPredicted RBP6.55□□□□□ -1.36
LDB1-203ENST00000461873 SUPT4H1P63272 117 aaKnown RBP6.55□□□□□ -1.36
LDB1-203ENST00000461873 CD300CQ08708 224 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 FCN2Q15485 313 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 ZNF124Q15973 351 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 TMEM128Q5BJH2 165 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 ACTL10Q5JWF8 245 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 PRSS54Q6PEW0 395 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 CEMP1Q6PRD7 247 aaPredicted RBP6.55□□□□□ -1.36
LDB1-203ENST00000461873 Q6ZRM9 215 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 OR51G1Q8NGK1 321 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 LHFPL5Q8TAF8 219 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 CHAC2Q8WUX2 184 aa6.55□□□□□ -1.36
LDB1-203ENST00000461873 CIB3Q96Q77 187 aaPredicted RBP6.55□□□□□ -1.36
LDB1-203ENST00000461873 FNDC4Q9H6D8 234 aaPredicted RBP6.55□□□□□ -1.36
LDB1-203ENST00000461873 SNRPGP15A8MWD9 76 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 CCSO14618 274 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 SSNA1O43805 119 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 SFT2D2O95562 160 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 TOMM40O96008 361 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 IGLC1P0CG04 106 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 BSXQ3C1V8 233 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 PSMG4Q5JS54 123 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 PVRIGQ6DKI7 326 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 SIGLEC15Q6ZMC9 328 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 LYZL2Q7Z4W2 148 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 C12orf45Q8N5I9 185 aaPredicted RBP6.54□□□□□ -1.36
LDB1-203ENST00000461873 ZNF431Q8TF32 576 aaPredicted RBP6.54□□□□□ -1.36
LDB1-203ENST00000461873 PHLDA1Q8WV24 401 aaPredicted RBP6.54□□□□□ -1.36
LDB1-203ENST00000461873 ZNF414Q96IQ9 312 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 C1QTNF4Q9BXJ3 329 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 MED28Q9H204 178 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 RBKSQ9H477 322 aa6.54□□□□□ -1.36
LDB1-203ENST00000461873 GPN1Q9HCN4 374 aaPredicted RBP6.54□□□□□ -1.36
LDB1-203ENST00000461873 RYR2Q92736 4967 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 C7orf66A4D0T2 115 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 PRAF2O60831 178 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 CFDP00746 253 aaPredicted RBP6.53□□□□□ -1.36
LDB1-203ENST00000461873 IFNA21P01568 189 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 CXCL3P19876 107 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 GPX4P36969 197 aaPredicted RBP6.53□□□□□ -1.36
LDB1-203ENST00000461873 RRAS2P62070 204 aaPredicted RBP6.53□□□□□ -1.36
LDB1-203ENST00000461873 AARDQ4LEZ3 155 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 NMSQ5H8A3 153 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 S100A7AQ86SG5 101 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 OR11H7Q8NGC8 314 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 COQ8AQ8NI60 647 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 NRN1Q9NPD7 142 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 MGAT4CQ9UBM8 478 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 HSPB7Q9UBY9 170 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 TMED3Q9Y3Q3 217 aa6.53□□□□□ -1.36
LDB1-203ENST00000461873 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 FAM90A26D6RGX4 464 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms