RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 KLK9Q9UKQ9 250 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 RNF24Q9Y225 148 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 RFNGQ9Y644 331 aa7.03□□□□□ -1.28
VPS50-207ENST00000458530 RBFOX3A6NFN3 312 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 FAM223BA6NKX1 122 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 F8W735 103 aaPredicted RBP7.02□□□□□ -1.29
VPS50-207ENST00000458530 K7EIM0 57 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 GNG7O60262 68 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 NDUFS6O75380 124 aaKnown RBP7.02□□□□□ -1.29
VPS50-207ENST00000458530 YIF1AO95070 293 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 IGF1P05019 195 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 EGR2P11161 476 aaPredicted RBP7.02□□□□□ -1.29
VPS50-207ENST00000458530 FCGR2BP31994 310 aaPredicted RBP7.02□□□□□ -1.29
VPS50-207ENST00000458530 FAM209BQ5JX69 171 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 ASPHD1Q5U4P2 390 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 SPSB3Q6PJ21 355 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 FAM223AQ8IWN6 122 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 NECAP1Q8NC96 275 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 TXNDC17Q9BRA2 123 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 NPFFR1Q9GZQ6 430 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 PRDM13Q9H4Q3 707 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 C21orf62Q9NYP8 219 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 TECRQ9NZ01 308 aaKnown RBP7.02□□□□□ -1.29
VPS50-207ENST00000458530 FBXL7Q9UJT9 491 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 FUT9Q9Y231 359 aa7.02□□□□□ -1.29
VPS50-207ENST00000458530 IGKV1OR2-108A0A075B7D4 117 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 TRBV7-1A0A0A6YYK4 115 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 A0A1B0GV50 99 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 BRI3O95415 125 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 IGHV4-59P01825 116 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 HSPB1P04792 205 aaKnown RBP7.01□□□□□ -1.29
VPS50-207ENST00000458530 CD5P06127 495 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 OR5G3P0C626 314 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 IGLC1P0CG04 106 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 BCL2P10415 239 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 ZNF726P1Q15940 193 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 MLANAQ16655 118 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 Q56UQ5 140 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 ZNF506Q5JVG8 444 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 C10orf113Q5VZT2 155 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 PQLC2Q6ZP29 291 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 IL17RELQ6ZVW7 336 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 IQCF2Q8IXL9 164 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 BCL6BQ8N143 479 aaPredicted RBP7.01□□□□□ -1.29
VPS50-207ENST00000458530 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.01□□□□□ -1.29
VPS50-207ENST00000458530 STXBP6Q8NFX7 210 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 OR5T1Q8NG75 326 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 SUN5Q8TC36 379 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 EEF1AKMT3Q96AZ1 226 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 FANCD2OSQ96PS1 177 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 PRSS22Q9GZN4 317 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 DNAJC4Q9NNZ3 241 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 TMEM167BQ9NRX6 74 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 GNG13Q9P2W3 67 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 VAX2Q9UIW0 290 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 DMRT1Q9Y5R6 373 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 ARL2-SNX15V9GYD0 113 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 PRKDCP78527 4128 aaKnown RBP7.01□□□□□ -1.29
VPS50-207ENST00000458530 NOTCH1P46531 2555 aa7.01□□□□□ -1.29
VPS50-207ENST00000458530 IGKV1D-37A0A075B6S9 117 aa7□□□□□ -1.29
VPS50-207ENST00000458530 LOC102723971A0A1B0GUV8 181 aa7□□□□□ -1.29
VPS50-207ENST00000458530 MDFIC2A0A1B0GVS7 189 aa7□□□□□ -1.29
VPS50-207ENST00000458530 TMEM218A2RU14 115 aa7□□□□□ -1.29
VPS50-207ENST00000458530 NUPL2O15504 423 aaKnown RBP7□□□□□ -1.29
VPS50-207ENST00000458530 TCF21O43680 179 aa7□□□□□ -1.29
VPS50-207ENST00000458530 HYPMO75409 117 aa7□□□□□ -1.29
VPS50-207ENST00000458530 OR2J3O76001 311 aa7□□□□□ -1.29
VPS50-207ENST00000458530 TOMM40O96008 361 aa7□□□□□ -1.29
VPS50-207ENST00000458530 AMY1AP04745 511 aa7□□□□□ -1.29
VPS50-207ENST00000458530 STAG3L2P0CL84 134 aa7□□□□□ -1.29
VPS50-207ENST00000458530 STAG3L3P0CL85 134 aa7□□□□□ -1.29
VPS50-207ENST00000458530 FGF8P55075 233 aaPredicted RBP7□□□□□ -1.29
VPS50-207ENST00000458530 PLP1P60201 277 aa7□□□□□ -1.29
VPS50-207ENST00000458530 YPEL3P61236 119 aaPredicted RBP7□□□□□ -1.29
VPS50-207ENST00000458530 RHOGP84095 191 aa7□□□□□ -1.29
VPS50-207ENST00000458530 FAM78BQ5VT40 261 aa7□□□□□ -1.29
VPS50-207ENST00000458530 OR51G1Q8NGK1 321 aa7□□□□□ -1.29
VPS50-207ENST00000458530 TMEM190Q8WZ59 177 aa7□□□□□ -1.29
VPS50-207ENST00000458530 SEC11CQ9BY50 192 aa7□□□□□ -1.29
VPS50-207ENST00000458530 MRPL18Q9H0U6 180 aaKnown RBP7□□□□□ -1.29
VPS50-207ENST00000458530 SLC35B3Q9H1N7 401 aa7□□□□□ -1.29
VPS50-207ENST00000458530 TRBV9A0A0B4J1U6 114 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 IGHV3-21A0A0B4J1V1 117 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 TMEM89A2RUT3 159 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 F8W036 122 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 OR7C2O60412 319 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 IGHV3-48P01763 117 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 SFTA3P0C7M3 94 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 RD3LP0DJH9 198 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 ARL14EPLP0DKL9 152 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 C8orf88P0DMB2 117 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 SLC35B1P78383 322 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 ATP5G2Q06055 141 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 HAGHQ16775 308 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 C15orf32Q32M92 178 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 C19orf54Q5BKX5 351 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 GCSAMLQ5JQS6 135 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 PRR31Q5SQ13 230 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 C12orf54Q6X4T0 127 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 C19orf35Q6ZS72 473 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms