RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 UNC119Q13432 240 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF497Q6ZNH5 498 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 GTSF1LQ9H1H1 148 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 AURKAIP1Q9NWT8 199 aaPredicted RBP4.37□□□□□ -1.71
CSMD3-204ENST00000455883 GRIFINA4D1Z8 144 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 SOCS3O14543 225 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 PF4P02776 101 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 SLAQ13239 276 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 DEFB132Q7Z7B7 95 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 PGLYRP4Q96LB8 373 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 TMEM42Q69YG0 159 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 C8orf44Q96CB5 159 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 A0A0G2JK05 382 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 ZIC3O60481 467 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 GFERP55789 205 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 LY6G6FQ5SQ64 297 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 LINC01551Q86U37 167 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 DPH3P1Q9H4G8 78 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 V9GYY9 64 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 C9orf118A6NHY6 69 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 CBLN3Q6UW01 205 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 RASL10AQ92737 203 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 WDR83OSQ9Y284 106 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 FAM223BA6NKX1 122 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 IGKV3-11P04433 115 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 CCL11P51671 97 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.37□□□□□ -1.71
CSMD3-204ENST00000455883 MIC13Q5XKP0 118 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF841Q6ZN19 808 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 Q71RC1 249 aaPredicted RBP4.37□□□□□ -1.71
CSMD3-204ENST00000455883 FAM223AQ8IWN6 122 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 UBE2WQ96B02 151 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 ZFP36L2P47974 494 aaKnown RBP4.37□□□□□ -1.71
CSMD3-204ENST00000455883 GLCCI1Q86VQ1 547 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 RNF125Q96EQ8 232 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 C20orf78Q9BR46 151 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 Q9H3A6 140 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 UNC79Q9P2D8 2635 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 J3QRE1 110 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 MRPL20Q9BYC9 149 aaKnown RBP4.37□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF815PA8K554 130 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 SPINK8P0C7L1 97 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 LOXL3P58215 753 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF525Q8N782 197 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 FOXC2Q99958 501 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 C6orf106Q9H6K1 298 aaPredicted RBP4.37□□□□□ -1.71
CSMD3-204ENST00000455883 NBR2O15453 112 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 IGHV4-34P06331 123 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 JPT2Q9H910 190 aa4.37□□□□□ -1.71
CSMD3-204ENST00000455883 IGKV3D-15A0A087WSY6 115 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 A0A1B0GWJ7 208 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 H3BUT2 72 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 FCN3O75636 299 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 EVI2AP22794 236 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 BIVMQ86UB2 503 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 AMN1Q8IY45 258 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 C8orf31Q8N9H6 132 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 KLHDC3Q9BQ90 382 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF576Q9H609 170 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 EPDR1Q9UM22 224 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 TOMM40O96008 361 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF83P51522 516 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 CD69Q07108 199 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 SSC4DQ8WTU2 575 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 TEX48A0A1B0GUV7 120 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 H0YGX0 51 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 UNQ5815/PRO19632Q6UWF5 114 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 FBXO17Q96EF6 278 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 PYGO2Q9BRQ0 406 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 ZNHIT1O43257 154 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 C1QL1O75973 258 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF750Q32MQ0 723 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 FHL5Q5TD97 284 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 BHLHA9Q7RTU4 235 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 TRACP01848 142 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 GAGE5Q13069 117 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 GAGE6Q13070 117 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 TMEM167AQ8TBQ9 72 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF418Q8TF45 676 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-204ENST00000455883 CT55Q8WUE5 264 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 TMEM14CQ9P0S9 112 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 VDAC2P45880 294 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-204ENST00000455883 PDLIM4P50479 330 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 MORN2Q502X0 79 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 C2orf82Q6UX34 121 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 RFESDQ8TAC1 157 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 IGLV3-12A0A075B6K2 115 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 A0A1B0GTL3 188 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 F12P00748 615 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-204ENST00000455883 COL10A1Q03692 680 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 RHOHQ15669 191 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 TMEFF1Q8IYR6 380 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 SMIM10L1P0DMW3 83 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 ANKRD29Q8N6D5 301 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 C11orf44Q8N8P7 122 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 SMIM10Q96HG1 83 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 HIGD1BQ9P298 99 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 RBMY1FQ15415 496 aaKnown RBP4.36□□□□□ -1.71
CSMD3-204ENST00000455883 EFNB3Q15768 340 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 TCTEX1D4Q5JR98 221 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms