RNA–Protein interactions for RNA: ENST00000455580.5

PPP1CB-208, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 3

Gene PPP1CB, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-208ENST00000455580 NUPR2A6NF83 97 aa17.55■□□□□ 0.4
PPP1CB-208ENST00000455580 CEMP1Q6PRD7 247 aaPredicted RBP17.55■□□□□ 0.4
PPP1CB-208ENST00000455580 TRPT1Q86TN4 253 aaKnown RBP17.55■□□□□ 0.4
PPP1CB-208ENST00000455580 OR51G1Q8NGK1 321 aa17.55■□□□□ 0.4
PPP1CB-208ENST00000455580 MED6O75586 246 aa17.54■□□□□ 0.4
PPP1CB-208ENST00000455580 IAPPP10997 89 aa17.54■□□□□ 0.4
PPP1CB-208ENST00000455580 UBE2MP61081 183 aaKnown RBP17.54■□□□□ 0.4
PPP1CB-208ENST00000455580 RAB11AP62491 216 aa17.54■□□□□ 0.4
PPP1CB-208ENST00000455580 RNF125Q96EQ8 232 aa17.54■□□□□ 0.4
PPP1CB-208ENST00000455580 SLC35E1Q96K37 410 aa17.54■□□□□ 0.4
PPP1CB-208ENST00000455580 ALMS1Q8TCU4 4167 aa17.54■□□□□ 0.4
PPP1CB-208ENST00000455580 NAP1L6A6NFF2 107 aa17.53■□□□□ 0.4
PPP1CB-208ENST00000455580 ZFP92A6NM28 416 aa17.53■□□□□ 0.4
PPP1CB-208ENST00000455580 KNCNA6PVL3 124 aa17.53■□□□□ 0.4
PPP1CB-208ENST00000455580 HOXB5P09067 269 aa17.53■□□□□ 0.4
PPP1CB-208ENST00000455580 GIG44P09565 113 aaPredicted RBP17.53■□□□□ 0.4
PPP1CB-208ENST00000455580 ZNF90Q03938 601 aa17.53■□□□□ 0.4
PPP1CB-208ENST00000455580 INPP1P49441 399 aa17.52■□□□□ 0.4
PPP1CB-208ENST00000455580 GGNBP1Q5YKI7 109 aa17.52■□□□□ 0.4
PPP1CB-208ENST00000455580 MORN3Q6PF18 240 aaPredicted RBP17.52■□□□□ 0.4
PPP1CB-208ENST00000455580 SIGLEC15Q6ZMC9 328 aa17.52■□□□□ 0.4
PPP1CB-208ENST00000455580 CIB3Q96Q77 187 aaPredicted RBP17.52■□□□□ 0.4
PPP1CB-208ENST00000455580 RAB40CQ96S21 281 aa17.52■□□□□ 0.4
PPP1CB-208ENST00000455580 SDHCQ99643 169 aaPredicted RBP17.52■□□□□ 0.4
PPP1CB-208ENST00000455580 C11orf68Q9H3H3 251 aaKnown RBP17.52■□□□□ 0.4
PPP1CB-208ENST00000455580 SEPSECSQ9HD40 501 aaKnown RBP17.52■□□□□ 0.4
PPP1CB-208ENST00000455580 NRN1Q9NPD7 142 aa17.52■□□□□ 0.4
PPP1CB-208ENST00000455580 SYNGR2O43760 224 aa17.51■□□□□ 0.39
PPP1CB-208ENST00000455580 NDUFB6O95139 128 aa17.51■□□□□ 0.39
PPP1CB-208ENST00000455580 SPP1P10451 314 aa17.51■□□□□ 0.39
PPP1CB-208ENST00000455580 TMEM41BQ5BJD5 291 aa17.51■□□□□ 0.39
PPP1CB-208ENST00000455580 ACTL10Q5JWF8 245 aa17.51■□□□□ 0.39
PPP1CB-208ENST00000455580 TRIQKQ629K1 86 aa17.51■□□□□ 0.39
PPP1CB-208ENST00000455580 OR8G2PQ6IF36 304 aa17.51■□□□□ 0.39
PPP1CB-208ENST00000455580 MAGT1Q9H0U3 335 aa17.51■□□□□ 0.39
PPP1CB-208ENST00000455580 C9orf170A2RU37 121 aa17.5■□□□□ 0.39
PPP1CB-208ENST00000455580 RPP30P78346 268 aaKnown RBP17.5■□□□□ 0.39
PPP1CB-208ENST00000455580 PSMG4Q5JS54 123 aa17.5■□□□□ 0.39
PPP1CB-208ENST00000455580 PBDC1Q9BVG4 233 aa17.5■□□□□ 0.39
PPP1CB-208ENST00000455580 PFDN2Q9UHV9 154 aa17.5■□□□□ 0.39
PPP1CB-208ENST00000455580 PAIP2BQ9ULR5 123 aaKnown RBP17.5■□□□□ 0.39
PPP1CB-208ENST00000455580 AGRNO00468 2067 aa17.5■□□□□ 0.39
PPP1CB-208ENST00000455580 SNRPGP15A8MWD9 76 aa17.49■□□□□ 0.39
PPP1CB-208ENST00000455580 WRBO00258 174 aa17.49■□□□□ 0.39
PPP1CB-208ENST00000455580 FABP1P07148 127 aa17.49■□□□□ 0.39
PPP1CB-208ENST00000455580 NUP62P37198 522 aaPredicted RBP17.49■□□□□ 0.39
PPP1CB-208ENST00000455580 SNRPD3P62318 126 aaKnown RBP17.49■□□□□ 0.39
PPP1CB-208ENST00000455580 TRGV9Q99603 122 aa17.49■□□□□ 0.39
PPP1CB-208ENST00000455580 FLVCR2Q9UPI3 526 aa17.49■□□□□ 0.39
PPP1CB-208ENST00000455580 KLK5Q9Y337 293 aaPredicted RBP17.49■□□□□ 0.39
PPP1CB-208ENST00000455580 IGKV1OR2-108A0A075B7D4 117 aa17.48■□□□□ 0.39
PPP1CB-208ENST00000455580 PRSS46E5RG02 174 aa17.48■□□□□ 0.39
PPP1CB-208ENST00000455580 THAP8Q8NA92 274 aa17.48■□□□□ 0.39
PPP1CB-208ENST00000455580 PHLDA1Q8WV24 401 aaPredicted RBP17.48■□□□□ 0.39
PPP1CB-208ENST00000455580 LINC00476Q8WZB0 136 aa17.48■□□□□ 0.39
PPP1CB-208ENST00000455580 EPPK1P58107 5090 aaKnown RBP17.47■□□□□ 0.39
PPP1CB-208ENST00000455580 ADAP1O75689 374 aa17.47■□□□□ 0.39
PPP1CB-208ENST00000455580 ID3Q02535 119 aa17.47■□□□□ 0.39
PPP1CB-208ENST00000455580 C11orf45Q8TAV5 145 aa17.47■□□□□ 0.39
PPP1CB-208ENST00000455580 LINC00854A0A1B0GVQ3 168 aa17.46■□□□□ 0.39
PPP1CB-208ENST00000455580 DEFB4AO15263 64 aa17.46■□□□□ 0.39
PPP1CB-208ENST00000455580 OR4E1P0C645 316 aa17.46■□□□□ 0.39
PPP1CB-208ENST00000455580 C4BPBP20851 252 aa17.46■□□□□ 0.39
PPP1CB-208ENST00000455580 NANOS2P60321 138 aaKnown RBP17.46■□□□□ 0.39
PPP1CB-208ENST00000455580 LYZP61626 148 aa17.46■□□□□ 0.39
PPP1CB-208ENST00000455580 OR2F1Q13607 317 aa17.46■□□□□ 0.39
PPP1CB-208ENST00000455580 SPANXN5Q5MJ07 72 aa17.46■□□□□ 0.39
PPP1CB-208ENST00000455580 C1orf194Q5T5A4 169 aa17.46■□□□□ 0.39
PPP1CB-208ENST00000455580 CENPXA8MT69 81 aa17.45■□□□□ 0.38
PPP1CB-208ENST00000455580 BTCP35070 178 aa17.45■□□□□ 0.38
PPP1CB-208ENST00000455580 Q8NAQ8 132 aa17.45■□□□□ 0.38
PPP1CB-208ENST00000455580 CSNK1G2-AS1Q8NCQ2 148 aa17.45■□□□□ 0.38
PPP1CB-208ENST00000455580 COQ8AQ8NI60 647 aa17.45■□□□□ 0.38
PPP1CB-208ENST00000455580 C7orf50Q9BRJ6 194 aaKnown RBP17.45■□□□□ 0.38
PPP1CB-208ENST00000455580 MFFQ9GZY8 342 aa17.45■□□□□ 0.38
PPP1CB-208ENST00000455580 FBXL17Q9UF56 701 aa17.44■□□□□ 0.38
PPP1CB-208ENST00000455580 STRAPQ9Y3F4 350 aaKnown RBP17.44■□□□□ 0.38
PPP1CB-208ENST00000455580 ZNF705EA8MWA4 302 aaPredicted RBP17.43■□□□□ 0.38
PPP1CB-208ENST00000455580 H3BMM0 161 aa17.43■□□□□ 0.38
PPP1CB-208ENST00000455580 LY6G6CO95867 125 aa17.43■□□□□ 0.38
PPP1CB-208ENST00000455580 CFDP00746 253 aaPredicted RBP17.43■□□□□ 0.38
PPP1CB-208ENST00000455580 IL7P13232 177 aa17.43■□□□□ 0.38
PPP1CB-208ENST00000455580 NKX2-1P43699 371 aaPredicted RBP17.43■□□□□ 0.38
PPP1CB-208ENST00000455580 IFNA21P01568 189 aa17.42■□□□□ 0.38
PPP1CB-208ENST00000455580 MIFP14174 115 aa17.42■□□□□ 0.38
PPP1CB-208ENST00000455580 ANXA7P20073 488 aaKnown RBP17.42■□□□□ 0.38
PPP1CB-208ENST00000455580 POLR2GP62487 172 aaKnown RBP eCLIP17.42■□□□□ 0.38
PPP1CB-208ENST00000455580 OR4D5Q8NGN0 318 aa17.42■□□□□ 0.38
PPP1CB-208ENST00000455580 WDR12Q9GZL7 423 aaKnown RBP17.42■□□□□ 0.38
PPP1CB-208ENST00000455580 CLEC5AQ9NY25 188 aa17.42■□□□□ 0.38
PPP1CB-208ENST00000455580 NDUFA13Q9P0J0 144 aa17.42■□□□□ 0.38
PPP1CB-208ENST00000455580 X6R8D5 127 aa17.42■□□□□ 0.38
PPP1CB-208ENST00000455580 H3BP45 60 aa17.41■□□□□ 0.38
PPP1CB-208ENST00000455580 RBMY1A1P0DJD3 496 aaKnown RBP17.41■□□□□ 0.38
PPP1CB-208ENST00000455580 RBMY1CP0DJD4 496 aa17.41■□□□□ 0.38
PPP1CB-208ENST00000455580 RBMY1FQ15415 496 aaKnown RBP17.41■□□□□ 0.38
PPP1CB-208ENST00000455580 C4orf46Q504U0 113 aa17.41■□□□□ 0.38
PPP1CB-208ENST00000455580 PPP1R14BQ96C90 147 aa17.41■□□□□ 0.38
PPP1CB-208ENST00000455580 IGHV4-28A0A0C4DH34 117 aa17.4■□□□□ 0.38
PPP1CB-208ENST00000455580 HLA-DRB4P13762 266 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms