RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 HSPB7Q9UBY9 170 aa9.46□□□□□ -0.89
CHD3-206ENST00000452447 KLK5Q9Y337 293 aaPredicted RBP9.46□□□□□ -0.89
CHD3-206ENST00000452447 K7EQG2 157 aa9.46□□□□□ -0.9
CHD3-206ENST00000452447 IFNA4P05014 189 aa9.46□□□□□ -0.9
CHD3-206ENST00000452447 IL4P05112 153 aa9.46□□□□□ -0.9
CHD3-206ENST00000452447 ZNF688P0C7X2 276 aa9.46□□□□□ -0.9
CHD3-206ENST00000452447 RD3LP0DJH9 198 aa9.46□□□□□ -0.9
CHD3-206ENST00000452447 S100A1P23297 94 aa9.46□□□□□ -0.9
CHD3-206ENST00000452447 KLF9Q13886 244 aaPredicted RBP9.46□□□□□ -0.9
CHD3-206ENST00000452447 OR1S1Q8NH92 325 aa9.46□□□□□ -0.9
CHD3-206ENST00000452447 SDHCQ99643 169 aaPredicted RBP9.46□□□□□ -0.9
CHD3-206ENST00000452447 LYRM1O43325 122 aa9.45□□□□□ -0.9
CHD3-206ENST00000452447 DHRS2Q13268 280 aa9.45□□□□□ -0.9
CHD3-206ENST00000452447 ASAH1Q13510 395 aa9.45□□□□□ -0.9
CHD3-206ENST00000452447 RGS21Q2M5E4 152 aa9.45□□□□□ -0.9
CHD3-206ENST00000452447 TMEM128Q5BJH2 165 aa9.45□□□□□ -0.9
CHD3-206ENST00000452447 ENKURQ8TC29 256 aa9.45□□□□□ -0.9
CHD3-206ENST00000452447 RBKSQ9H477 322 aa9.45□□□□□ -0.9
CHD3-206ENST00000452447 PTTG1O95997 202 aa9.44□□□□□ -0.9
CHD3-206ENST00000452447 TOMM40O96008 361 aa9.44□□□□□ -0.9
CHD3-206ENST00000452447 VAMP1P23763 118 aa9.44□□□□□ -0.9
CHD3-206ENST00000452447 ATP5IP56385 69 aaPredicted RBP9.44□□□□□ -0.9
CHD3-206ENST00000452447 C16orf54Q6UWD8 224 aa9.44□□□□□ -0.9
CHD3-206ENST00000452447 DCANP1Q8TF63 244 aa9.44□□□□□ -0.9
CHD3-206ENST00000452447 LINC00476Q8WZB0 136 aa9.44□□□□□ -0.9
CHD3-206ENST00000452447 SLC25A21Q9BQT8 299 aaPredicted RBP9.44□□□□□ -0.9
CHD3-206ENST00000452447 U3KQE9 123 aa9.44□□□□□ -0.9
CHD3-206ENST00000452447 BIRC6Q9NR09 4857 aa9.43□□□□□ -0.9
CHD3-206ENST00000452447 FAM240BA0A1B0GVZ2 78 aa9.43□□□□□ -0.9
CHD3-206ENST00000452447 DUXBA0A1W2PPF3 345 aa9.43□□□□□ -0.9
CHD3-206ENST00000452447 ZFP92A6NM28 416 aa9.43□□□□□ -0.9
CHD3-206ENST00000452447 LY6G6CO95867 125 aa9.43□□□□□ -0.9
CHD3-206ENST00000452447 PSG1P11464 419 aa9.43□□□□□ -0.9
CHD3-206ENST00000452447 USF2Q15853 346 aaPredicted RBP9.43□□□□□ -0.9
CHD3-206ENST00000452447 TMEM41BQ5BJD5 291 aa9.43□□□□□ -0.9
CHD3-206ENST00000452447 C11orf45Q8TAV5 145 aa9.43□□□□□ -0.9
CHD3-206ENST00000452447 PHLDA1Q8WV24 401 aaPredicted RBP9.43□□□□□ -0.9
CHD3-206ENST00000452447 MFFQ9GZY8 342 aa9.43□□□□□ -0.9
CHD3-206ENST00000452447 GPX4P36969 197 aaPredicted RBP9.42□□□□□ -0.9
CHD3-206ENST00000452447 RAB11AP62491 216 aa9.42□□□□□ -0.9
CHD3-206ENST00000452447 ACTL10Q5JWF8 245 aa9.42□□□□□ -0.9
CHD3-206ENST00000452447 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
CHD3-206ENST00000452447 TRPT1Q86TN4 253 aaKnown RBP9.42□□□□□ -0.9
CHD3-206ENST00000452447 OR51G1Q8NGK1 321 aa9.42□□□□□ -0.9
CHD3-206ENST00000452447 GLMPQ8WWB7 406 aa9.42□□□□□ -0.9
CHD3-206ENST00000452447 SLC35E1Q96K37 410 aa9.42□□□□□ -0.9
CHD3-206ENST00000452447 PBDC1Q9BVG4 233 aa9.42□□□□□ -0.9
CHD3-206ENST00000452447 C11orf68Q9H3H3 251 aaKnown RBP9.42□□□□□ -0.9
CHD3-206ENST00000452447 PFDN2Q9UHV9 154 aa9.42□□□□□ -0.9
CHD3-206ENST00000452447 LINC00854A0A1B0GVQ3 168 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 KNCNA6PVL3 124 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 BUB3O43684 328 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 SPP1P10451 314 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 NUP62P37198 522 aaPredicted RBP9.41□□□□□ -0.9
CHD3-206ENST00000452447 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
CHD3-206ENST00000452447 NDUFA5Q16718 116 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 PSMG4Q5JS54 123 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 SIGLEC15Q6ZMC9 328 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 RNF125Q96EQ8 232 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 DEFB4AO15263 64 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 PITX3O75364 302 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 MED6O75586 246 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 FABP1P07148 127 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 SLC25A6P12236 298 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 NANOS2P60321 138 aaKnown RBP9.41□□□□□ -0.9
CHD3-206ENST00000452447 GAMTQ14353 236 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 CENPSQ8N2Z9 138 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 LRTM2Q8N967 370 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 NRN1Q9NPD7 142 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 FBXL17Q9UF56 701 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 TMED3Q9Y3Q3 217 aa9.41□□□□□ -0.9
CHD3-206ENST00000452447 FAM90A26D6RGX4 464 aa9.4□□□□□ -0.9
CHD3-206ENST00000452447 IAPPP10997 89 aa9.4□□□□□ -0.9
CHD3-206ENST00000452447 RPP30P78346 268 aaKnown RBP9.4□□□□□ -0.9
CHD3-206ENST00000452447 PPP1R1AQ13522 171 aa9.4□□□□□ -0.9
CHD3-206ENST00000452447 RAB40CQ96S21 281 aa9.4□□□□□ -0.9
CHD3-206ENST00000452447 FRAS1Q86XX4 4008 aa9.39□□□□□ -0.91
CHD3-206ENST00000452447 SNRPGP15A8MWD9 76 aa9.39□□□□□ -0.91
CHD3-206ENST00000452447 SFT2D2O95562 160 aa9.39□□□□□ -0.91
CHD3-206ENST00000452447 HOXB5P09067 269 aa9.39□□□□□ -0.91
CHD3-206ENST00000452447 GIG44P09565 113 aaPredicted RBP9.39□□□□□ -0.91
CHD3-206ENST00000452447 NUTF2P61970 127 aaKnown RBP9.39□□□□□ -0.91
CHD3-206ENST00000452447 ZNF90Q03938 601 aa9.39□□□□□ -0.91
CHD3-206ENST00000452447 OR8G2PQ6IF36 304 aa9.39□□□□□ -0.91
CHD3-206ENST00000452447 CIB3Q96Q77 187 aaPredicted RBP9.39□□□□□ -0.91
CHD3-206ENST00000452447 ARPC5LQ9BPX5 153 aa9.39□□□□□ -0.91
CHD3-206ENST00000452447 SEPSECSQ9HD40 501 aaKnown RBP9.39□□□□□ -0.91
CHD3-206ENST00000452447 TBC1D24Q9ULP9 559 aa9.39□□□□□ -0.91
CHD3-206ENST00000452447 PLA2G10O15496 165 aa9.38□□□□□ -0.91
CHD3-206ENST00000452447 C4BPBP20851 252 aa9.38□□□□□ -0.91
CHD3-206ENST00000452447 LYZP61626 148 aa9.38□□□□□ -0.91
CHD3-206ENST00000452447 IGKV1D-37A0A075B6S9 117 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 WRBO00258 174 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 SYNGR2O43760 224 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 MIFP14174 115 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 IFITM3Q01628 133 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 Q8NAQ8 132 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 C1QTNF4Q9BXJ3 329 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 MAGT1Q9H0U3 335 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 CLEC5AQ9NY25 188 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms