RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 HELTA6NFD8 242 aa9.1□□□□□ -0.95
CPSF4-208ENST00000452047 BUB3O43684 328 aa9.1□□□□□ -0.95
CPSF4-208ENST00000452047 RD3LP0DJH9 198 aa9.1□□□□□ -0.95
CPSF4-208ENST00000452047 PSG1P11464 419 aa9.1□□□□□ -0.95
CPSF4-208ENST00000452047 SLC25A6P12236 298 aa9.1□□□□□ -0.95
CPSF4-208ENST00000452047 S100A5P33763 92 aa9.1□□□□□ -0.95
CPSF4-208ENST00000452047 EIF2B2P49770 351 aaKnown RBP9.1□□□□□ -0.95
CPSF4-208ENST00000452047 OR1S1Q8NH92 325 aa9.1□□□□□ -0.95
CPSF4-208ENST00000452047 FRAS1Q86XX4 4008 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 IGKV1D-37A0A075B6S9 117 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 KNCNA6PVL3 124 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 IFNA4P05014 189 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 SPP1P10451 314 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 C4BPBP20851 252 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 VAMP1P23763 118 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 GPX4P36969 197 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-208ENST00000452047 AP2S1P53680 142 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-208ENST00000452047 DHRS2Q13268 280 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 PPP1R1AQ13522 171 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 GAMTQ14353 236 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 RGS21Q2M5E4 152 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 OR51G1Q8NGK1 321 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 RNF125Q96EQ8 232 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 SRRQ9GZT4 340 aa9.09□□□□□ -0.95
CPSF4-208ENST00000452047 FAM90A26D6RGX4 464 aa9.08□□□□□ -0.96
CPSF4-208ENST00000452047 SFT2D2O95562 160 aa9.08□□□□□ -0.96
CPSF4-208ENST00000452047 ZNF90Q03938 601 aa9.08□□□□□ -0.96
CPSF4-208ENST00000452047 MORN3Q6PF18 240 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-208ENST00000452047 SIGLEC15Q6ZMC9 328 aa9.08□□□□□ -0.96
CPSF4-208ENST00000452047 CENPSQ8N2Z9 138 aa9.08□□□□□ -0.96
CPSF4-208ENST00000452047 Q8NAQ8 132 aa9.08□□□□□ -0.96
CPSF4-208ENST00000452047 PHLDA1Q8WV24 401 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-208ENST00000452047 NRN1Q9NPD7 142 aa9.08□□□□□ -0.96
CPSF4-208ENST00000452047 KLK5Q9Y337 293 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-208ENST00000452047 TMED3Q9Y3Q3 217 aa9.08□□□□□ -0.96
CPSF4-208ENST00000452047 IGKV1OR2-108A0A075B7D4 117 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 ZFP92A6NM28 416 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 DEFB4AO15263 64 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 LY6G6CO95867 125 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 IAPPP10997 89 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 NANOS2P60321 138 aaKnown RBP9.07□□□□□ -0.96
CPSF4-208ENST00000452047 TMEM41BQ5BJD5 291 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 PSMG4Q5JS54 123 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 ACTL10Q5JWF8 245 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 SPANXN2Q5MJ10 180 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 OR8G2PQ6IF36 304 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 SLC35E1Q96K37 410 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 RAB40CQ96S21 281 aa9.07□□□□□ -0.96
CPSF4-208ENST00000452047 SEPSECSQ9HD40 501 aaKnown RBP9.07□□□□□ -0.96
CPSF4-208ENST00000452047 ZNF705EA8MWA4 302 aaPredicted RBP9.06□□□□□ -0.96
CPSF4-208ENST00000452047 PRSS46E5RG02 174 aa9.06□□□□□ -0.96
CPSF4-208ENST00000452047 NUP62P37198 522 aaPredicted RBP9.06□□□□□ -0.96
CPSF4-208ENST00000452047 UBE2MP61081 183 aaKnown RBP9.06□□□□□ -0.96
CPSF4-208ENST00000452047 BAK1Q16611 211 aa9.06□□□□□ -0.96
CPSF4-208ENST00000452047 CSNK1G2-AS1Q8NCQ2 148 aa9.06□□□□□ -0.96
CPSF4-208ENST00000452047 C11orf45Q8TAV5 145 aa9.06□□□□□ -0.96
CPSF4-208ENST00000452047 PBDC1Q9BVG4 233 aa9.06□□□□□ -0.96
CPSF4-208ENST00000452047 MFFQ9GZY8 342 aa9.06□□□□□ -0.96
CPSF4-208ENST00000452047 BIRC6Q9NR09 4857 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 SYNGR2O43760 224 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 MED6O75586 246 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 NDUFB6O95139 128 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 HOXB5P09067 269 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 RBMY1A1P0DJD3 496 aaKnown RBP9.05□□□□□ -0.96
CPSF4-208ENST00000452047 RBMY1CP0DJD4 496 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 SNRPD3P62318 126 aaKnown RBP9.05□□□□□ -0.96
CPSF4-208ENST00000452047 RAB11AP62491 216 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 OXA1LQ15070 435 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 RBMY1FQ15415 496 aaKnown RBP9.05□□□□□ -0.96
CPSF4-208ENST00000452047 GGNBP1Q5YKI7 109 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 THAP8Q8NA92 274 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 CIB3Q96Q77 187 aaPredicted RBP9.05□□□□□ -0.96
CPSF4-208ENST00000452047 TRGV9Q99603 122 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 SDHCQ99643 169 aaPredicted RBP9.05□□□□□ -0.96
CPSF4-208ENST00000452047 MAGT1Q9H0U3 335 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 X6R8D5 127 aa9.05□□□□□ -0.96
CPSF4-208ENST00000452047 hCG_2014768A0A024R1R8 64 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 C9orf170A2RU37 121 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 H3BMM0 161 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 FABP1P07148 127 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 MIFP14174 115 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 BTCP35070 178 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 BCAP31P51572 246 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 LYZP61626 148 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 FAM210AQ96ND0 272 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 HRH4Q9H3N8 390 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 CLEC5AQ9NY25 188 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 FBXL17Q9UF56 701 aa9.04□□□□□ -0.96
CPSF4-208ENST00000452047 NAP1L6A6NFF2 107 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 SNRPGP15A8MWD9 76 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 WRBO00258 174 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 SOCS3O14543 225 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 ADAP1O75689 374 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 HLA-DRB4P13762 266 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 NKX2-1P43699 371 aaPredicted RBP9.03□□□□□ -0.96
CPSF4-208ENST00000452047 OR2F1Q13607 317 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 C1orf194Q5T5A4 169 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 GDF5OSQ5U4N7 250 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 TRIQKQ629K1 86 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms